Table 3. Sequence analysis of the currently available bifidobacterial genomes for the motif identified upstream of Bbr_0221 and Bbr_0885.
| Strain | Bbr_0221 Homolog | Motif | Bbr_0885 Homolog | Motif |
|---|---|---|---|---|
|
B. breve DSM 20213 |
BIFBRE_01998 |
AAAATCAAGACTGTTGTT |
BIFBRE_01208 |
AAAAACAAGACTTGTGTT |
|
B. infantisATCC15697 |
Blon_0196 |
AAAATCAAGACTGTTGTT |
Blon_1615 |
AAAAACAAGACTTGTGTT |
|
B. longum DJO10A |
BLD_1255 |
AAAATCAAGACTGTTCCT |
|
|
|
B. longum infantis ATCC 55813 |
HMPREF0175_0087 |
AAAATCAAGACTGTTCCT |
|
|
|
B. longum NCC2705 |
BL0455 |
AAAATCAAGACTGTTCCT |
BL0889 |
AAAAACAAGACTTGTGTT |
|
B. longum infantis CCUG 52486 |
BLIG_00474 |
AAAATCAAGACTGTTCCT |
|
|
|
B. bifidum NCIMB 41171 |
BbifN4_010100006928 |
AAAGTCAAGACTGTTCTT |
BbifN4_010100003655 |
AAAGTCAAGGCTTGTGTT |
|
B. dentium ATCC 27678 |
BIFDEN_00651 |
AAAATCAAGACTGTTCTT |
BIFDEN_02200 |
AAAGTCAAGACTTTTCTT |
|
B. angulatum DSM 20098 |
BIFANG_02052 |
AAAATCAAGACTGTTGTT |
BIFANG_02981 |
AAGTCAAGTCTTGTTTTT |
|
B.pseudocatenulatum DSM 20438 |
BIFPSEUDO_04117 |
AAAATCAAGACTGTTCTT |
|
|
|
B. catenulatum DSM 16992 |
BIFCAT_00140 |
AAAATCAAGACTGTTCTT |
BIFCAT_00981 |
AAAAACAAGACTATCTTT |
|
B. adolescentis ATCC 15703 |
BAD_0097 |
AAAATCAAGACTGTTATT |
|
|
| B. adolescentis L2–32 | BIFADO_00280 | AAAATCAAGACTGTTATT | ||