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. 2012 Jun;22(6):1154–1162. doi: 10.1101/gr.135780.111

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© 2012, Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 3.0 Unported License), as described at http://creativecommons.org/licenses/by-nc/3.0/.

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Figure 3. — (A–C) Measuring lobSTR consistency from two samples of the same individual; (green) period 2; (orange) period 3; (red) period 4; (blue) period 5; (purple) period 6; (black) all. (A) Loci covered in both samples at increasing coverage thresholds. (B) The genotype discordance rate as a function of coverage threshold. (C) The allelic discordance rate as a function of coverage threshold. (D) Number of repeat differences at heterozygous loci. (Blue) No difference; (red) integer numbers of repeat differences; (green) noninteger numbers of repeat differences. Most discordance calls consist of a single repeat unit difference between calls in the two samples. Distance was measured as the second minimum distance between alleles of the two samples. The y-axis is given in a square root scale.