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. 2012 Jun 3;2012:976972. doi: 10.1155/2012/976972

Table 1.

PCR target genes and primers used in this work.

Genes Nucleotide sequence of primers PCR annealing temperature (°C) Amplicon size (bp) Reference
icaA (intercellular adhesion gene) 5-ACACTTGCTGGCGCAGTCAA-3 55°C 188 Rohde et al., 2001 [6]
5-TCTGGAACCAACATCCAACA-3
icaD (intercellular adhesion gene) 5-ATGGTCAAGCCCAGACAGAG-3 55°C 198 Rohde et al., 2001 [6]
5-AGTATTTTCAATGTTTAAAGCAA-3
icaB (intercellular adhesion gene) 5-AGAATCGTGAAGTATAGAAAATT-3 55°C* 900 Kiem et al., 2004 [7]
5-TCTAATCTTTTTCATGGAATCCGT-3′
icaC (intercellular adhesion gene) 5-ATGGGACGGATTCCATGAAAAAGA-3 55°C* 1100 Kiem et al., 2004 [7]
5-TAATAAGCATTAATGTTCAATT-3
eno (laminin binding protein) 5-ACGTGCAGCAGCTGACT-3 55°C 301 Tristan et al., 2003 [8]
5-CAACAGCATCTTCAGTACCTTC-3
ebpS (elastin binding protein) 5-CATCCAGAACCAATCGAAGAC-3 55°C 180 Tristan et al., 2003 [8]
5- AGTTACATCATCATGTTTATCTTTTG-3
fnbA (fibronectin binding protein A) 5-CATAAATTGGGAGCAGCATCA-3 55°C* 128 Vancraeynest et al., 2004 [9]
5- ATCAGCAGCTGAATTCCCATT-3
fnbB (fibronectin binding protein B) 5-GTAACAGCTAATGGTCGAATTGATACT-3 55°C 523 Tristan et al., 2003 [8]
5-CAAGTTCGATAGGAGTACTATGTTC-3
fib (fibrinogen binding protein) 5-CTACAACTACAATTGCGTCAACAG-3 55°C 405 Tristan et al., 2003 [8]
5-GCTCTTGTAAGACCATTTTCTTCAC-3
clfA (clumping factor A) 5-ATTGGCGTGGCTTCAGTGCT-3 55°C 288 Tristan et al., 2003 [8]
5-CGTTTCTTCCGTAGTTGCATTTG-3
clfB (clumping factor B) 5-ACATCAGTAATAGTAGGGGCAAC-3 55°C 203 Tristan et al., 2003 [8]
5-TTCGCACTGTTTGTGTTTGCAC-3
bbp (bone sialoprotein binding protein) 5-AACTACATCTAGTACTCAACAACAG-3 55°C 574 Tristan et al., 2003 [8]
5-ATGTGCTTGAATAACACCATCATCT-3
cna (collagen binding protein) 5-AAAGCGTTGCCTAGTGGAGA-3 55°C 192 Montanaro et al., 1999 [10]
5-AGTGCCTTCCCAAACCTTTT-3

*Optimized PCR annealing temperature program in this study at 55°C.