Table 1.
Genes | Nucleotide sequence of primers | PCR annealing temperature (°C) | Amplicon size (bp) | Reference |
---|---|---|---|---|
icaA (intercellular adhesion gene) | 5-ACACTTGCTGGCGCAGTCAA-3 | 55°C | 188 | Rohde et al., 2001 [6] |
5-TCTGGAACCAACATCCAACA-3 | ||||
icaD (intercellular adhesion gene) | 5-ATGGTCAAGCCCAGACAGAG-3 | 55°C | 198 | Rohde et al., 2001 [6] |
5-AGTATTTTCAATGTTTAAAGCAA-3 | ||||
icaB (intercellular adhesion gene) | 5-AGAATCGTGAAGTATAGAAAATT-3 | 55°C* | 900 | Kiem et al., 2004 [7] |
5-TCTAATCTTTTTCATGGAATCCGT-3′ | ||||
icaC (intercellular adhesion gene) | 5-ATGGGACGGATTCCATGAAAAAGA-3 | 55°C* | 1100 | Kiem et al., 2004 [7] |
5-TAATAAGCATTAATGTTCAATT-3 | ||||
eno (laminin binding protein) | 5-ACGTGCAGCAGCTGACT-3 | 55°C | 301 | Tristan et al., 2003 [8] |
5-CAACAGCATCTTCAGTACCTTC-3 | ||||
ebpS (elastin binding protein) | 5-CATCCAGAACCAATCGAAGAC-3 | 55°C | 180 | Tristan et al., 2003 [8] |
5- AGTTACATCATCATGTTTATCTTTTG-3 | ||||
fnbA (fibronectin binding protein A) | 5-CATAAATTGGGAGCAGCATCA-3 | 55°C* | 128 | Vancraeynest et al., 2004 [9] |
5- ATCAGCAGCTGAATTCCCATT-3 | ||||
fnbB (fibronectin binding protein B) | 5-GTAACAGCTAATGGTCGAATTGATACT-3 | 55°C | 523 | Tristan et al., 2003 [8] |
5-CAAGTTCGATAGGAGTACTATGTTC-3 | ||||
fib (fibrinogen binding protein) | 5-CTACAACTACAATTGCGTCAACAG-3 | 55°C | 405 | Tristan et al., 2003 [8] |
5-GCTCTTGTAAGACCATTTTCTTCAC-3 | ||||
clfA (clumping factor A) | 5-ATTGGCGTGGCTTCAGTGCT-3 | 55°C | 288 | Tristan et al., 2003 [8] |
5-CGTTTCTTCCGTAGTTGCATTTG-3 | ||||
clfB (clumping factor B) | 5-ACATCAGTAATAGTAGGGGCAAC-3 | 55°C | 203 | Tristan et al., 2003 [8] |
5-TTCGCACTGTTTGTGTTTGCAC-3 | ||||
bbp (bone sialoprotein binding protein) | 5-AACTACATCTAGTACTCAACAACAG-3 | 55°C | 574 | Tristan et al., 2003 [8] |
5-ATGTGCTTGAATAACACCATCATCT-3 | ||||
cna (collagen binding protein) | 5-AAAGCGTTGCCTAGTGGAGA-3 | 55°C | 192 | Montanaro et al., 1999 [10] |
5-AGTGCCTTCCCAAACCTTTT-3 |
*Optimized PCR annealing temperature program in this study at 55°C.