Table 1.
Symbol | Entrez name | Location | Type(s) | Function annotation |
---|---|---|---|---|
DDX5 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | Nucleus | Enzyme | rRNA processing |
DDX17 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | Nucleus | Enzyme | RNA modification, unwinding, and processing |
DDX21 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 | Nucleus | Enzyme | RNA modification and unwinding |
DDX50 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 | Nucleus | Enzyme | RNA modification and unwinding |
DHX15 | DEAH (Asp-Glu-Ala-His) box polypeptide 15 | Nucleus | Enzyme | RNA modification and processing |
EIF4A1 | Eukaryotic translation initiation factor 4A, isoform 1 | Cytoplasm | Translation regulator | mRNA binding, unwinding, and modification |
FBL | Fibrillarin | Nucleus | Other | rRNA processing |
HNRNPA1 | Heterogeneous nuclear ribonucleoprotein A1 | Nucleus | Other | RNA modification, processing, and splicing |
HNRNPH3 | Heterogeneous nuclear ribonucleoprotein H3 (2H9) | Nucleus | Other | RNA modification, processing, and splicing |
HNRNPR | Heterogeneous nuclear ribonucleoprotein R | Nucleus | Other | RNA modification and processing |
HNRNPL | Heterogeneous nuclear ribonucleoprotein L | Nucleus | Other | RNA modification, processing, and splicing |
HNRNPM | Heterogeneous nuclear ribonucleoprotein M | Plasma membrane | Transmembrane receptor | RNA splicing |
NPM1 | Nucleophosmin (nucleolar phosphoprotein B23, numatrin) | Nucleus | Transcription regulator | rRNA processing |
SF3B3 | Splicing factor 3b, subunit 3, 130 kDa | Nucleus | Other | RNA modification, processing, and splicing |
SYNCRIP | Synaptotagmin binding, cytoplasmic RNA interacting protein | Nucleus | Other | RNA modification, processing, and splicing |
WDR43 | WD repeat domain 43 | Nucleus | Other | rRNA processing |
Proteins associate with TβRI only in MCF10A/HER2 and MDA-MB-231 cells and not in MCF10A cells.