Table v.

Top 10 genes identified from linear kernel, IBS kernel, weighted IBS (wIBS) kernel and min test respectively.

Gene	Chr	# SNPs	p-values				Rank
			Linear	IBS	wIBS	min test	Linear	IBS	wIBS	min test
DPY19L3	19	2	3.34e−05	2.07e−05	2.29e−05	6.86e−05	1	1	1	1
KALRN	3	53	1.06e−03	2.80e−04	2.40e−04	1.73e−02	12	2	2	180
XKR4	8	46	2.06e−03	3.40e−04	5.10e−04	8.68e−03	17	3	6	102
MARCH10	17	4	2.70e−04	5.10e−04	5.60e−04	1.04e−03	2	4	7	13
ERI1	8	2	1.03e−03	5.30e−04	4.50e−04	3.06e−03	11	5	4	48
RARB	3	8	4.20e−04	5.30e−04	3.80e−04	4.99e−03	3	5	3	66
ZNF230	19	2	1.19e−03	5.90e−04	1.09e−03	2.14e−03	14	7	14	34
ZNF644	1	4	6.76e−03	6.30e−04	7.80e−04	8.50e−04	48	8	8	12
TMEM106B	7	5	6.40e−04	7.40e−04	4.90e−04	1.83e−03	4	9	5	27
TNS4	17	2	1.11e−03	9.60e−04	9.20e−04	1.30e−03	13	10	10	18
ADAM7	8	3	2.28e−03	1.01e−03	8.60e−04	7.58e−04	19	11	9	11
PID1	2	26	6.50e−04	1.11e−03	1.51e−03	3.22e−03	5	12	16	50
FNDC1	6	20	9.80e−04	1.23e−03	2.91e−03	4.20e−04	10	13	30	6
C8orf37	8	2	8.10e−04	1.25e−03	1.05e−03	4.83e−04	7	14	13	8
PITPNB	22	2	8.30e−04	1.27e−03	1.01e−03	1.79e−03	9	15	12	26
LYPD6	2	10	8.20e−04	2.20e−03	3.43e−03	1.99e−02	8	19	37	205
PTCH1	9	6	7.00e−04	2.27e−03	1.19e−02	1.22e−03	6	21	86	17
CASS4	20	2	1.14e−02	3.37e−03	9.20e−04	7.30e−04	78	33	10	10
CYFIP1	15	9	8.86e−03	8.35e−03	2.44e−03	3.40e−04	62	61	25	4
LAMA4	6	9	4.33e−02	1.87e−02	6.10e−03	4.20e−04	347	137	51	7
MAP1B	5	2	1.73e−02	1.88e−02	6.38e−03	5.87e−04	132	140	53	9
SLC6A6	3	2	1.86e−02	2.01e−02	6.46e−03	3.14e−04	140	152	54	3
EYA2	20	37	1.23e−02	3.45e−02	5.44e−02	2.49e−04	84	279	439	2
A2BP1	16	257	1.52e−01	9.30e−02	5.92e−02	3.80e−04	1197	730	476	5