Table 1. Characteristics of the amplicons submitted to HRM analysis.
Segment | Primer Sequences 5′–3′ | Samples | Variant | GenBank Accession Number | Amplicon Size |
5 | GIM seg5 5F ATGGATGGTCTAAATACAACTTC | GF-025 | Insert IN4 | EU130923 | 98 |
GIM seg5 1R ACAGCATTTGATGAACTCTTCTC | GF-797 GF-603 | No insert Q266 | EU851044 | 65 | |
GF-552 GF-918 | No insert L266 | GU830907 | 65 | ||
6 | GIM seg6 3F TCATGAGGGAGGTAGCATTG | GF-797 GF-603* | HPR0 | EU118820 | 192 |
GIM seg6 5R CAATCCCAAAACCTGCTACAC | GF-552 | HPR2 | AF364889 | 132 | |
GF-041 | HPR5 | EU625673 | 129 | ||
GF-025 | HPR7b | FJ594319 | 123 | ||
GF-918 | HPR8 | AY973192 | 120 |