TABLE 1:
Name | Sequence | Relative binding to retromer CSC | Stoichiometry (N) by ITC | Kd (μM) by ITC | Endosomal localization |
---|---|---|---|---|---|
FN | 356–600 | ++ | 0.32 ± 0.23 | 11.5 ± 3.8 | |
FC | 938–1341∆1029–1047 | +++ | 0.42 ± 0.04 | 2.4 ± 0.6 | |
FC* | 938–1341 | – | |||
FM | 601–900 | + | |||
R17 | 1186–1221 | – | |||
R20 | 1280–1317 | + | |||
R21 | 1309–1341 | + | 0.82 ± 0.24 | 16.6 ± 4.3 | |
R17-18 | 1186–1254 | – | |||
R19-20 | 1250–1317 | +++ | 0.39 ± 0.12 | 6.8 ± 1.4 | |
R20-21 | 1278–1341 | +++ | 0.49 ± 0.02 | 2.5–16.6a | |
R17-19 | 1186–1285 | + | |||
R17-20 | 1186–1317 | +++ | |||
R17-21 | 1186–1341 | +++ | |||
R15-20 | 1121–1317 | +++ | |||
No R | 938–1120 | – | |||
R5-21 | 496–1341 | +++ | |||
R6-21 | 549–1341 | + | |||
R7-21 | 594–1341 | +/– | |||
R9-21 | 675–1341 | +/– | |||
R11-21 | 743–1341 | – | |||
R5-20 | 496–1309 | +/– | |||
R5-19 | 496–1275 | – | |||
R1-19 | 357–1275 | + | |||
R5-21/ΔR11-14 | 496–1341/Δ803–888 | +/– | |||
Fusion FC*/ R11-21 | 938–1341/743–1341 fusion | +++ |
1/N is the number of retromer CSCs bound to each Fam21 fragment.
aSee Materials and Methods for explanation of range.