Figure 4.

Schematic diagrams illustrating the chromosomal locations of the conserved haplotypes identified in traditional breeds for (a) oocyan and (b) duplex phenotypes, and the surrounding genes. The P-value at each SNP within the oocyan haplotype is included as are the genotypes for the Chilean village chicken; genotypes incompatible with the dominant inheritance of the phenotype are shaded. The two SNPs concordant with the phenotype in the village chicken are outlined. The genotypes for the duplex haplotype are indicated in brackets after the SNP identifier.