Table 1.
Proportion of Essential Genes (%) |
||
---|---|---|
Categories | Current Data Seta | Data from Makino et al. (2009) |
All genes | 43.3 | 42.07 |
Duplicates | 43.9 (41.6b) | 41.92 |
Singletons | 41.1 | 42.61 |
All developmental genes | 62.53 | 59.51 |
Developmental duplicates | 64.75 | 60.9 |
Developmental singletons | 53.1 | 53.36 |
Old duplications (Ksc ≥ 2) | 47.31 | 44.94 |
a MGI 4.4 (October 2010).
b If only genes with valid phyletic ages are used.
c If a gene has multiple duplicates, all pairwise Ks (the number of synonymous substitutions per synonymous site) between this gene and its duplicates will be calculated, and the lowest Ks value is used. Synonymous substitutions in most genes with Ks ≥ 2 will have reached saturation, and hence, the corresponding genes will tend to be older than genes with Ks < 2.