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. 2012 Mar 13;13(Suppl 2):S2. doi: 10.1186/1471-2105-13-S2-S2

Table 1.

Comparing our method with HPeak (bin size 25 bp).

FDR Peak/Threshold Ratio # of Regions Ratio of Overlap with
HPeak (%)
0.05 5 108393 100

0.05 10 35243 100

0.03 9 24213 100

0.03 10 20421 93.09

0.02 8 21699 98.11

0.02 10 15612 80.90

0.01 6 22859 100

0.01 6.5 20358 96.65

0.01 8 15302 80.01