Table 2.
Amino acid sequence identities (in percentile) among reported sequences of orthologs of PvRACK1 and other organisms, including that of the reported Gβ -like subunit of a heterotrimeric protein from Glycine max (GLYMA) which yields the highest identity score with PvRACK1. The other sequences obtained from the GenBank were those of Arabidopsis thaliana (ARATH), Brassica napus (BRANA), Chlamydomonas reinhardtii (CHLRE), Medicago sativa (MEDSA), Nicotiana plumbaginifolia (NICPL), N. tabacum (NICTA), Ostreococcus lucimarinus (OSTLU), O. tauri (OSTTA), Oryza sativa (ORYSA), Solanum lycopersicum (SOLLY), and S. tuberosum (SOLTU). Not included in the table are 66% identities of PvRACK1 to both Homo sapiens and Mus musculus RACK1. The protein alignment analysis was performed utilizing the MUSCLE and BIOEDIT software package.
| CHLRE | CHLRE | ||||||||||||||||
| OSTLU | 78.5 | OSTLU | |||||||||||||||
| OSTTA | 51.2 | 62 | OSTTA | ||||||||||||||
| ARATH3 | 67.4 | 65 | 43.1 | ARATH3 | |||||||||||||
| BRANA | 66.8 | 63.5 | 42.1 | 96 | BRANA | ||||||||||||
| ARATH2 | 67.3 | 66.7 | 44.4 | 87.4 | 87.1 | ARATH2 | |||||||||||
| ARATH1 | 67.6 | 66.4 | 44 | 87.1 | 86.5 | 92.9 | ARATH1 | ||||||||||
| MEDSA | 69.4 | 69.6 | 46.1 | 85.3 | 84.1 | 85.3 | 85.3 | MEDSA | |||||||||
| GLYMA | 68.1 | 68.1 | 45.1 | 85 | 84.4 | 85.3 | 85.3 | 95.3 | GLYMA | ||||||||
| PVRACK1 | 69.3 | 69.3 | 45.8 | 85 | 84.4 | 86.1 | 86.1 | 96 | 96.6 | PVRACK1 | |||||||
| NICPL2 | 66.4 | 66.1 | 44.3 | 78.7 | 79.3 | 79.2 | 78.6 | 83.7 | 82.5 | 83.1 | NICPL2 | ||||||
| NICTA1 | 66.4 | 66.1 | 44.3 | 78.7 | 78.7 | 79.2 | 78.6 | 83.7 | 82.8 | 83.1 | 96.3 | NICTA1 | |||||
| NICPL1 | 67.5 | 66.6 | 44.5 | 80.2 | 79.6 | 79.8 | 79.2 | 84.4 | 83.2 | 83.8 | 90.2 | 91.1 | NICPL1 | ||||
| SOLLY2 | 68.5 | 67.3 | 44.9 | 80.7 | 80.4 | 81 | 81 | 84.7 | 83.2 | 84.7 | 90.8 | 91.7 | 92.6 | SOLLY2 | |||
| SOLLY1 | 68.5 | 67.9 | 45.3 | 81.1 | 80.2 | 80.7 | 80.1 | 86.5 | 84.9 | 85.5 | 91.1 | 92 | 94.2 | 93.9 | SOLLY1 | ||
| SOLTU | 68 | 68 | 45.4 | 80.1 | 79.8 | 80.1 | 80.1 | 84.7 | 82.9 | 84 | 90.8 | 90.8 | 93.2 | 93.5 | 95.4 | SOLTU | |
| ORYSA1 | 65.1 | 65.3 | 42.6 | 66 | 66.3 | 66 | 66.3 | 66.2 | 66.5 | 66.4 | 66.2 | 67.1 | 68.1 | 67.1 | 68 | 66.6 | ORYSA1 |
| ORYSA2 | 67.6 | 66.4 | 44 | 69.6 | 69.3 | 68.7 | 69 | 71 | 70.4 | 70.9 | 69.5 | 69.5 | 71.1 | 71 | 71.5 | 71 | 81.8 |