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. Author manuscript; available in PMC: 2013 May 15.
Published in final edited form as: Psychiatry Res. 2012 Mar 27;197(1-2):49–54. doi: 10.1016/j.psychres.2011.11.022

Table 3.

COMD attempters (n=105) versus non-attempters (n=96): Genotype distributions for HOMER1 and NPTX2 polymorphisms

Locus SNP Phenotype Genotype Chisq Genotype p d.f. Allele p
HOMER1 rs7713917 AA AG GG
SA+ 21 49 35 0.15 0.93 2 0.70
SA− 21 44 30
rs4704560 CC CT TT
SA+ 27 50 28 0.76 0.68 2 0.67
SA− 25 40 30
rs2290639 TT TA AA
SA+ 30 39 36 12.42 0.003* 2 0.64
SA− 14 58 24
rs2404150 GG GA AA
SA+ 26 40 39 6.27 0.04 2 0.11
SA− 11 47 38
rs7702760 CC CA AA
SA+ 10 44 51 2.84 0.24 2 0.11
SA− 7 31 58
rs4132033 GG GC CC
SA+ 25 51 29 3.31 0.19 2 0.07
SA− 33 44 19
rs10942889 TT TG GG
SA+ 27 44 34 2.79 0.25 2 0.13
SA− 29 46 21

NPTX2 rs1681248 GG GC CC
SA+ 93 10 2 FET 0.006* - 0.02
SA− 71 24 1
rs705318 TT TG GG
SA+ 14 40 51 5.84 0.05 2 0.05
SA− 20 40 36
rs705315 GG GA AA
SA+ 93 9 3 FET 0.01* - 0.07
SA− 73 22 1

FET: Fisher’s Exact Test

COMD: Childhood-Onset Mood Disorder

SA+: COMD with history of lifetime suicide attempt, n = 119

SA−: COMD with no history of lifetime suicide attempt, n = 109

*

Significant after spectral decomposition (SNPSpD; Nyholt, 2004)