Table 3.
COMD attempters (n=105) versus non-attempters (n=96): Genotype distributions for HOMER1 and NPTX2 polymorphisms
| Locus | SNP | Phenotype | Genotype | Chisq | Genotype p | d.f. | Allele p | ||
|---|---|---|---|---|---|---|---|---|---|
| HOMER1 | rs7713917 | AA | AG | GG | |||||
| SA+ | 21 | 49 | 35 | 0.15 | 0.93 | 2 | 0.70 | ||
| SA− | 21 | 44 | 30 | ||||||
| rs4704560 | CC | CT | TT | ||||||
| SA+ | 27 | 50 | 28 | 0.76 | 0.68 | 2 | 0.67 | ||
| SA− | 25 | 40 | 30 | ||||||
| rs2290639 | TT | TA | AA | ||||||
| SA+ | 30 | 39 | 36 | 12.42 | 0.003* | 2 | 0.64 | ||
| SA− | 14 | 58 | 24 | ||||||
| rs2404150 | GG | GA | AA | ||||||
| SA+ | 26 | 40 | 39 | 6.27 | 0.04 | 2 | 0.11 | ||
| SA− | 11 | 47 | 38 | ||||||
| rs7702760 | CC | CA | AA | ||||||
| SA+ | 10 | 44 | 51 | 2.84 | 0.24 | 2 | 0.11 | ||
| SA− | 7 | 31 | 58 | ||||||
| rs4132033 | GG | GC | CC | ||||||
| SA+ | 25 | 51 | 29 | 3.31 | 0.19 | 2 | 0.07 | ||
| SA− | 33 | 44 | 19 | ||||||
| rs10942889 | TT | TG | GG | ||||||
| SA+ | 27 | 44 | 34 | 2.79 | 0.25 | 2 | 0.13 | ||
| SA− | 29 | 46 | 21 | ||||||
| NPTX2 | rs1681248 | GG | GC | CC | |||||
| SA+ | 93 | 10 | 2 | FET | 0.006* | - | 0.02 | ||
| SA− | 71 | 24 | 1 | ||||||
| rs705318 | TT | TG | GG | ||||||
| SA+ | 14 | 40 | 51 | 5.84 | 0.05 | 2 | 0.05 | ||
| SA− | 20 | 40 | 36 | ||||||
| rs705315 | GG | GA | AA | ||||||
| SA+ | 93 | 9 | 3 | FET | 0.01* | - | 0.07 | ||
| SA− | 73 | 22 | 1 | ||||||
FET: Fisher’s Exact Test
COMD: Childhood-Onset Mood Disorder
SA+: COMD with history of lifetime suicide attempt, n = 119
SA−: COMD with no history of lifetime suicide attempt, n = 109
Significant after spectral decomposition (SNPSpD; Nyholt, 2004)