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. Author manuscript; available in PMC: 2013 Jun 14.
Published in final edited form as: J Phys Chem B. 2012 Apr 23;116(23):6952–6959. doi: 10.1021/jp3003992

Table 1.

Normalized overlap volume matrix of the four crystal cluster representatives for AR, the four MD cluster representatives for AR and the four REMD cluster representatives for AR 310 K. Cross normalized overlap volumes between the crystal, MD and REMD shapes shaded green

Crystal
1T74 2AMA 2AXA 2HVC
1T74 1.00 0.69 0.45 0.66
2AMA 0.69 1.00 0.56 0.57
2AXA 0.45 0.56 1.00 0.51
2HVC 0.66 0.57 0.51 1.00
  MD e f g h
e 0.70 0.57 0.41 0.57 1.00 0.71 0.59 0.66
f 0.71 0.59 0.46 0.60 0.71 1.00 0.55 0.61
g 0.57 0.57 0.48 0.46 0.59 0.55 1.00 0.69
h 0.56 0.55 0.49 0.46 0.66 0.61 0.69 1.00
REMD i j k l
i 0.63 0.57 0.38 0.50 0.64 0.64 0.57 0.54 1.00 0.70 0.60 0.64
j 0.70 0.59 0.38 0.53 0.69 0.70 0.54 0.53 0.70 1.00 0.58 0.55
k 0.56 0.53 0.45 0.44 0.57 0.57 0.59 0.56 0.60 0.58 1.00 0.50
l 0.51 0.42 0.29 0.41 0.53 0.51 0.50 0.41 0.64 0.55 0.50 1.00