Table 1. Top 20 candidate genes that cooperate with KrasG12D to promote mPDA in KCTSB13 mice.
Gene | Chr | CIS Peak Location | CIS Height | N | I | Mutation in humans |
---|---|---|---|---|---|---|
| ||||||
Usp9x | X | 12691773 | 158.1266 | 101 | 341 | |
Pten | 19 | 32872602 | 64.5204 | 61 | 96 | |
Fndc3b | 3 | 27562591 | 13.7096 | 55 | 67 | |
Setd5 | 6 | 113057997 | 35.6176 | 52 | 71 | |
Arfip1|Fbxw7 | 3 | 84769635 | 21.6666 | 48 | 80 | Yes5 |
Fam193a | 5 | 34705809 | 24.3555 | 45 | 78 | |
Ctnna1 | 18 | 35342868 | 20.2017 | 45 | 50 | |
Magi1 | 6 | 93859940 | 13.3715 | 43 | 57 | |
Mkln1 | 6 | 31414109 | 16.5263 | 41 | 53 | |
Pum1 | 4 | 130288478 | 12.7948 | 41 | 46 | Yes5 |
Farp1 | 14 | 121587858 | 9.407 | 39 | 47 | |
Foxp1 | 6 | 98921646 | 19.5831 | 38 | 60 | |
Arid1a | 4 | 133268936 | 32.1628 | 38 | 47 | Yes5 |
Acvr1b | 15 | 101024934 | 31.1752 | 38 | 47 | Yes15 |
Map4k3 | 17 | 81109860 | 13.2385 | 38 | 45 | Yes5 |
Stag2 | X | 39535994 | 16.8613 | 37 | 48 | |
Mll5 | 5 | 22982314 | 16.0001 | 37 | 43 | Yes5 |
Atxn2|Sh2b3 | 5 | 122267680 | 12.3174 | 37 | 41 | |
Arhgap5 | 12 | 53644560 | 37.416 | 35 | 61 | |
Gsk3b | 16 | 38106972 | 21.79 | 35 | 43 |