Table 1.
Gene* (location) |
Protein function | Pathway | References |
---|---|---|---|
IL23R (1p31) |
IL-23 receptor subunit |
IL-23 signalling |
(Capon et al., 2008; Cargill et al., 2007; Ellinghaus et al., 2010; Nair et al., 2009; Strange et al., 2010) |
IL28RA (1p36) |
IL-29 receptor subunit. |
IFN signalling | (Strange et al., 2010) |
LCE3B/3C/3D (1q21) |
Keratinocyte structural protein |
Skin barrier function |
(de Cid et al., 2009; Ellinghaus et al., 2010; Zhang et al., 2009) |
REL (2p16) |
NF-κB subunit | NF-κB signalling |
(Strange et al., 2010) |
IFIH1/ MDA5 (2q24) |
Innate antiviral receptor |
IFN signalling | (Strange et al., 2010) |
ERAP1 (5q15) |
Amino peptidase processing MHC class I ligands |
Antigen presentation |
(Strange et al., 2010; Sun et al., 2010a) |
IL4,IL13 (5q31) |
Th2 cytokines | IL-4/IL-13 signalling |
(Nair et al., 2009) |
IL12B (5q33) |
Subunit shared by the IL-12 and IL-23 cytokines |
IL-23 signalling |
(Cargill et al., 2007; Ellinghaus et al., 2010; Nair et al., 2009; Zhang et al., 2009) (Huffmeier et al.,2010)** |
TNIP1 (5q33) |
Inhibitor of TNF- induced NF-κB activation |
NF-κB signalling |
(Nair et al., 2009; Strange et al., 2010; Sun et al., 2010a) |
PTTG1 (5q33) |
Anaphase promoting complex substrate |
Cell cycle control/DNA repair |
(Sun et al., 2010a) |
HLA-C (6p21) |
MHC class I antigen |
Antigen presentation |
(Capon et al., 2008; Ellinghaus et al., 2010; Nair et al., 2009; Strange et al., 2010; Zhang et al., 2009) |
TRAF3IP2 (6q21) |
Adaptor mediating IL-17 induced NF-kB activation |
IL-17/NF-□B signalling |
(Ellinghaus et al., 2010; Strange et al., 2010) (Huffmeier et al., 2010)** |
TNFAIP3 (6q23) |
Inhibitor of TNF- induced NF-κB activation |
NF-κB signalling |
(Nair et al., 2009; Strange et al., 2010) |
CSMD1 (8p23) |
Tumour suppressor gene |
Unknown | (Sun et al., 2010a) |
IL23A (12q13) |
IL-23 subunit | IL-23 signalling |
(Nair et al., 2009; Strange et al., 2010) |
GJB2 (13q11) |
Gap junction protein |
Electrolyte transport |
(Sun et al., 2010a) |
NFKBIA (14q13) |
Inhibitor of NF-κB activation |
NF-κB signalling |
(Strange et al., 2010; Stuart et al., 2010) |
FBXL19 (16p11) |
Putative inhibitor of NF-κB activation |
NF-κB signalling |
(Stuart et al., 2010) |
NOS2 (17q11) |
Induced nitric oxide synthase |
Innate antibacterial response |
(Stuart et al., 2010) |
SERPINB8 (18q21) |
Serine protease inhibitor |
Unknown | (Sun et al., 2010a) |
TYK2 (19p13) |
Tyrosine kinase associated with cytokine receptors |
IL-23 and IFN signalling |
(Strange et al., 2010) |
ZNF816A (19q13) |
Zinc Finger Protein |
Unknown | (Sun et al., 2010a) |
ZNF313/RNF114 (20q13) |
E3 ubiquitin ligase |
IFN signalling | (Capon et al., 2008; Nair et al., 2009; Strange et al., 2010; Stuart et al., 2010) |
All the loci included in the Table showed genome-wide significant association (P < 5 × 10−8) with psoriasis, in at least one GWAS.
Gene of interest found in the disease-associated susceptibility interval;
Psoriatic arthritis GWAS.