Table 2. Ultrasequencing values for integrins and extracellular matrix-related genes.
Gene family | Gene name | Ensembl number | Fold change | ||
50 µg/mL Doxyc. | 200 µg/mL Doxyc. | 500 µg/mL Doxyc. | |||
Integrins | CTGF | ENSG00000118523 | −2.04 | −2.70 | −4.55 |
CRELD1 | ENSG00000163703 | 2.60 | 3.40 | 3.47 | |
CYR61 | ENSG00000142871 | −1.82 | −1.92 | −2,33 | |
ICAM1 | ENSG00000090339 | 2.13 | 3.40 | 3.89 | |
ITGA4 | ENSG00000115232 | −1.33 | −2.04 | −1.64 | |
ITGA5 | ENSG00000161638 | 1.87 | 2.26 | 2.31 | |
ITGB1 | ENSG00000150093 | −1.16 | −1.69 | −1.35 | |
ITGB8 | ENSG00000105855 | −1.54 | −2.50 | −1.89 | |
ITGBL1 | ENSG00000198542 | −1.43 | −1.72 | −2.13 | |
Integrin-interacting proteins | SLC3A2 | ENSG00000168003 | 2.75 | 3.22 | 3.15 |
THBS1 | ENSG00000137801 | −1.39 | −1.67 | −1.85 | |
SVEP1 | ENSG00000165124 | −1.44 | −1.71 | −2.06 | |
Collagens | COL12A1 | ENSG00000111799 | −1.32 | −1.92 | −1.82 |
COL5A2 | ENSG00000204262 | −1.25 | −1.47 | −1.61 | |
Extracellular matrix | LAMB1 | ENSG00000091136 | −1.52 | −2.04 | −2.33 |
LAMA3 | ENSG00000053747 | −1.47 | −1.41 | −1.32 | |
LAMA4 | ENSG00000112769 | −1.33 | −1.82 | −1.79 | |
SPARC | ENSG00000113140 | −1.09 | −1.18 | −1.37 |
Values are represented as the mean fold change of 10 patients with respect to untreated controls.