Table 2. Relative proportion of the cutaneous microbiome in each sample.
Samples | 100066 | 100067 | 100069 | 100070 | 100072 | 100073 |
Total reads, Soap andBlastN filtered | 2,849,108 | 4,556,951 | 7,690,427 | 1,572,456 | 4,422,817 | 5,255,640 |
Assignment % total reads (reads number) | ||||||
Archea | <0.1% (122) | 0.1%(3,610) | <0.1% (220) | <0.1% (526) | 0.4%(17,660) | <0.1% (251) |
Eubacteria | 23.1% (658,075) | 60,7% (2,766,794) | 8.7% (672,919) | 57.2% (900,033) | 65.0% (2,876,654) | 67.3% (3,537,704) |
Plasmids | 0.3% (9,750) | 0.5% (22,233) | 0.3% (22,198) | 1.5% (23,226) | 2.9% (129,944) | 2.4% (128,941) |
Phages | <0.1% (235) | 0.3%(12,167) | <0.1% (187) | 5.4% (84,750) | 0.3% (14,746) | 0.8% (41,532) |
Eukaryotes* | 2.7% (78,235) | 13.6% (619,289) | 3.1% (235,257) | 22.4% (352,549) | 6.5% (28,7,559) | 6.1% (320,590) |
Other** | 0.5% (15,008) | 1.6% (74,572) | 0.2% (16,734) | 0.7% (10,746) | 0.7% (31,084) | 0.9% (47,682) |
Eukaryotic DNA virus | 73.0% (2,080,343) | 13.9% (632,345) | 87.1% (6,698,716) | 6.9% (108,428) | 22.6% (1,001,937) | 21.9% (1,152,828) |
Unassigned reads | 0.3% (7,340) | 9.3% (425,941) | 0.6% (44,196) | 5.9% (92,198) | 1.4% (63,233) | 0,5% (26,112) |
-*Eukaryotes denotes Fungi, Viridiplantae, Protozoa and Metazoa sequences.
- **Other denotes metagenome, vectors, RNA virus, endogenous retrovirus and unclassified sequences.