Table 4. Genomic organization of 9 new Human gamma-papillomavirus sequences.
| GenBank accession number | JF966371* | JF966372 | JF966374 | JF966373 | JF966375* | JF966376 | JF966377 | JF966378** | JF966379** |
| Genome lenght (nt) | 7300 | 7299 | 7251 | 7167 | 7286 | 7219 | 7265 | 7152 | 7095 |
| Most closely related HPV type (accession number) | HPV 65(X70829) | HPV 112(EU541442) | HPV 129(GU233853) | HPV 60(U31792) | HPV 65(X70829) | HPV 116(GU233853) | HPV 127(HM011570) | HPV 148(GU129016) | HPV 148(GU129016) |
| Nucleotide (amino acid) sequence similarity (%) of L1 | 66,6 (77.4) | 62.5 (73.3) | 66.2 (80.3) | 67.3 (79.9) | 65.5 (77.8) | 69.7 (82.1) | 65.3 (74.8) | 79.2 (92.6) | 70.9 (83.0) |
| E6 | 103–519 (138) | 103–528 (141) | 103–627 (174) | 103–546 (147) | 103–546 (147) | 103–528 (141) | 103–525 (140) | 103–519 (138) | 103–519 (138) |
| E7 | 521–805 (94) | 525–815 (96) | 630–926 (98) | 521–814 (97) | 521–808 (95) | 533–823 (96) | 522–815 (97) | 519–800 (93) | 519–80 0 (93) |
| E1 | 789–2615 (608) | 799–2640 (613) | 913–2724 (603) | 798–2603 (601) | 792–2615 (607) | 810–2642 (610) | 802–2622 (606) | 784–2592 (602) | 784–2580 (598) |
| E2 | 2557–3750 (397) | 2573–3754 (393) | 2660–3829 (389) | 2539–3750 (403) | 2557–3744 (395) | 2578–3744 (388) | 2558–3766 (402) | 2525–3724 (399) | 2513–3685 (390) |
| E4 | 3023–3508 (161) | – | 3033–3590 (185) | 3011–3508 (165) | 3023–3505 (160) | 3041–3508 (155) | 3090–3533 (147) | 3108–3482 (124) | 3096–3443 (115) |
| L2 | 3752–5350 (532) | 3761–5305 (514) | 3831–5333 (500) | 3750–5279 (509) | 3746–5341 (531) | 3747–5273 (508) | 3771–5300 (509) | 3724–5232 (502) | 3687–5180 (497) |
| L1 | 5307–6857 (516)$ | 5316–6872 (518) | 5342–6925 (527) | 5269–6816 (515)$ | 5313–6848 (511) | 5282–6841 (519) | 5248–6858 (536)$ | 5244–6776 (510) | 5191–6717 (508) |
For HPV's genes E6 to L1, open reading frame positions and numbering are indicated with the size of the respective predicted protein in brackets.
- $ deduced from the second start codon likely predicted for in vivo use.