Table 2.

Additional resources at NCBI as it apply to fungi, website URLs and their utility.

Resource	Data type	URL	URL Utility
Other resources
Trace Archive	primary sequence	http://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE=Nucleotides&PROGRAM=blastn&BLAST_SPEC=TraceArchive&BLAST_PROGRAMS=megaBlast&PAGE_TYPE=BlastSearch	Search the Trace Archive using a sequence based approach with Blast.
Trace Assembly Archive	primary sequence	http://www.ncbi.nlm.nih.gov/Traces/assembly/assmbrowser.cgi?cmd=show&f=tree&m=main&s=tree	Search Trace Assembly by species name.
RefSeq	derived	http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=%22Fungi%22[Organism]+AND+type_refseq[prop]	A list of Fungi RefSeq projects.
TPA	derived	http://www.ncbi.nlm.nih.gov/genbank/TPA.html	Detailed information about what can and cannot be submitted as Third Party Annotation.
Gnomon gene prediction	derived	http://www.ncbi.nlm.nih.gov/genome/guide/gnomon.shtml	Description of the single genome Gnomon gene prediction pipeline.
GeneRIF		http://www.ncbi.nlm.nih.gov/projects/GeneRIF/GeneRIFhelp.html	Information on how the research community can add functional annotation to genes in Entrez Gene.
Organelle Genome Resources	derived	http://www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?taxid=4751&opt=organelle	A list of fungi with complete mitochondrial genomes and links to data.