Table 1.
The primer sequences of the oligonucleotides used for ChIP, RT-PCR, qRT-PCR, and cloning
Name | Gene ID | Application | Sequences |
---|---|---|---|
Human hepcidin, first from the left of Fig. 1A | 57817 | ChIP | Forward, 5′-CAGTGGTTGGTTGGATGGAT |
Reverse, 5′-TTGTGGGAAGAGACGAGTGC | |||
Human hepcidin second site | 57817 | ChIP | Forward, 5′-AACCGGCTCCCCAAAAAC |
Reverse, 5′-CCCCGTCGGACACTCATT | |||
Human hepcidin third site | 57817 | ChIP | Forward, 5′-CGCCGTGTGGAGTCTTATTC |
Reverse, 5′-GCTTATGGGGGCTTCCTCT | |||
Human hepcidin fourth site | 57817 | ChIP | Forward, 5′-GTCCCCTCCCTTCCTTATTT |
Reverse, 5′-CTTTCATCCCCTATTATTGCAAC | |||
Human hepcidin | 57817 | RT-PCR | Forward, 5′-CCTGACCAGTGGCTCTGTTT |
Reverse, 5′-CACATCCCACACTTTGATCG | |||
Human GAPDH | 2597 | RT-PCR | Forward, 5′-TGGTATCGTGGAAGGACTC |
Reverse, 5′-AGTAGAGGCAGGGATGATG | |||
Mouse GAPDH | 14433 | qPCR | Forward, 5′-GGCATTGCTCTCAATGACAA |
Reverse, 5′-CCCTGTTGCTGTAGCCGTAT | |||
Mouse hepcidin-1 | 84506 | qPCR | Forward, 5′-AGAAAGCAGGGCAGACATTG |
Reverse, 5′-GATGCAGATGGGGAAGTTGG | |||
Mouse hepcidin-2 | 66438 | qPCR | Forward, 5′-AGAAAGCAGGGCAGACATTG |
Reverse, 5′-TCTGCAGATGGGGAAGTTGA | |||
Human hepcidin promoter (3171 bp) | 57817 | Luciferase activity | Forward, 5′-TCTCGAGCTCAAGCTTGTCTGTCTGTCGCCCTTCTC |
Reverse, 5′-GGCGACCGGTGGATCCGTCTGGGACCGAGTGACAGT | |||
Human hepcidin promoter | 57817 | ERE deletion | Forward, 5′-AGGGTGTGGGGAGCTGGAGGACATGTCCCATGTTG |
Reverse, 5′-CAACATGGGACATGTCCTCCAGCTCCCCACACCCT | |||
Human hepcidin probe with WT ERE | 57817 | EMSA | Forward, 5′-AGGGTGTGGGGAGCTGGGGTCAAGGACATGTCCCATGTTG |
Reverse, 5′-CAACATGGGACATGTCCTTGACCCCAGCTCCCCACACCCT | |||
Human hepcidin probe with mutated ERE | 57817 | EMSA | Forward, 5′-AGGGTGTGGGGAGCTGGAAAAAAGGACATGTCCCATGTTG |
Reverse, 5′-CAACATGGGACATGTCCTTTTTTCCAGCTCCCCACACCCT | |||
TfR1 | 22042 | qPCR | Forward, 5′-CATGAGGGAAATCAATGATCG |
Reverse, 5′-ACATAGGGCGACAGGAAGTG | |||
DMT-1 | 18174 | qPCR | Forward, 5′-TGGGTCTGTCTTTCCTGGAC |
Reverse, 5′-CATCCACGGTGTTCAGAAGAT |