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. 2012 Apr 25;153(7):3170–3178. doi: 10.1210/en.2011-2045

Table 1.

The primer sequences of the oligonucleotides used for ChIP, RT-PCR, qRT-PCR, and cloning

Name Gene ID Application Sequences
Human hepcidin, first from the left of Fig. 1A 57817 ChIP Forward, 5′-CAGTGGTTGGTTGGATGGAT
Reverse, 5′-TTGTGGGAAGAGACGAGTGC
Human hepcidin second site 57817 ChIP Forward, 5′-AACCGGCTCCCCAAAAAC
Reverse, 5′-CCCCGTCGGACACTCATT
Human hepcidin third site 57817 ChIP Forward, 5′-CGCCGTGTGGAGTCTTATTC
Reverse, 5′-GCTTATGGGGGCTTCCTCT
Human hepcidin fourth site 57817 ChIP Forward, 5′-GTCCCCTCCCTTCCTTATTT
Reverse, 5′-CTTTCATCCCCTATTATTGCAAC
Human hepcidin 57817 RT-PCR Forward, 5′-CCTGACCAGTGGCTCTGTTT
Reverse, 5′-CACATCCCACACTTTGATCG
Human GAPDH 2597 RT-PCR Forward, 5′-TGGTATCGTGGAAGGACTC
Reverse, 5′-AGTAGAGGCAGGGATGATG
Mouse GAPDH 14433 qPCR Forward, 5′-GGCATTGCTCTCAATGACAA
Reverse, 5′-CCCTGTTGCTGTAGCCGTAT
Mouse hepcidin-1 84506 qPCR Forward, 5′-AGAAAGCAGGGCAGACATTG
Reverse, 5′-GATGCAGATGGGGAAGTTGG
Mouse hepcidin-2 66438 qPCR Forward, 5′-AGAAAGCAGGGCAGACATTG
Reverse, 5′-TCTGCAGATGGGGAAGTTGA
Human hepcidin promoter (3171 bp) 57817 Luciferase activity Forward, 5′-TCTCGAGCTCAAGCTTGTCTGTCTGTCGCCCTTCTC
Reverse, 5′-GGCGACCGGTGGATCCGTCTGGGACCGAGTGACAGT
Human hepcidin promoter 57817 ERE deletion Forward, 5′-AGGGTGTGGGGAGCTGGAGGACATGTCCCATGTTG
Reverse, 5′-CAACATGGGACATGTCCTCCAGCTCCCCACACCCT
Human hepcidin probe with WT ERE 57817 EMSA Forward, 5′-AGGGTGTGGGGAGCTGGGGTCAAGGACATGTCCCATGTTG
Reverse, 5′-CAACATGGGACATGTCCTTGACCCCAGCTCCCCACACCCT
Human hepcidin probe with mutated ERE 57817 EMSA Forward, 5′-AGGGTGTGGGGAGCTGGAAAAAAGGACATGTCCCATGTTG
Reverse, 5′-CAACATGGGACATGTCCTTTTTTCCAGCTCCCCACACCCT
TfR1 22042 qPCR Forward, 5′-CATGAGGGAAATCAATGATCG
Reverse, 5′-ACATAGGGCGACAGGAAGTG
DMT-1 18174 qPCR Forward, 5′-TGGGTCTGTCTTTCCTGGAC
Reverse, 5′-CATCCACGGTGTTCAGAAGAT