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. 2012 Jun 21;7(6):e39467. doi: 10.1371/journal.pone.0039467

Table 2. Melting temperatures (T m)a of Hum24 and Hum48 G4DNA, ligand bound to pre-formed G4DNA and complexes produced when G4DNA was formed in presence of the indicated ligand at [ligand]:[DNA] ratio ‘r’ = 20 for the monomeric and ‘r’ = 10 for the gemini ligands in 100 mM KCl solution.

Entry ODN/ODN-ligand Pre-formed G4DNA G4DNA formed in presence of the ligand
T m °C ΔT m °Cb T m °C ΔT m °Cb
1. Hum24 46 0 46
2. Hum24 + M 52 5 55 9
3. Hum24 + D1 62 16 70 24
4. Hum24 + D2 58 12 79 33
5. Hum24 + D3 68 22 84 38
6. Hum48 51 0 51
7. Hum48 + M 60 9 65 14
8. Hum48 + D1 67 16 79 28
9. Hum48 + D2 69 18 87 34
10. Hum48+ D3 72 21 89 38
a

Changes in the circular dichroism spectral peak (at 295 nm for the G4DNA and the pre-formed G4DNA-ligand complex; at 266 nm for the G4DNA-ligand complex formed in presence of ligand) monitored as a function of temperature using 2 µM strand ODN concentration. bΔT m values were obtained from the difference in the melting temperatures of the ligand bound and uncomplexed G4DNA. For the G4DNA-ligand complexes when G4DNA was formed in presence of the ligand, the solution was first heated to 95°C for 5 min and then cooled slowly. The results are average of two experiments and are within ±0.5°C of each other.