Table 1.
Study | Race-ethnicity/country | Genotyping Platform | Traits | Discovery |
---|---|---|---|---|
FBPP1 | AA (n=3962)/Whites (n=3667)/Hispanics (n=1612)/Asian(n=1557) U.S. |
Genome-wide linkage | Pulse pressure | chromosome 7 at 75 cM, LOD 3.1 in AA, chromosome 19 at 0 cM LOD 3.1 in combined sample whites and AA, and a region on chromosome 18 at 71 cM LOD score of 3.2 in whites, AA, and Hispanics. |
FBPP2 | AA (n=3962)/Whites (n=3667)/Hispanics (n=1612)/Asian(n=2154): U.S. |
Genome-wide linkage, race-specific meta- analyses |
Pulse pressure | chromosome 6, 42.27 cM LOD 3.76 Raw PP, LOD 3.23 Medication adjusted PP, (META): chromosome 1 212.44 LOD 2.82 Raw PP, LOD 3.16 Medication adjusted PP, HyperGEN) |
HyperGEN3 | AA(n=1251) U.S. | Genome Scan | Pulse Pressure | Chromosome 1, 215 cM, LOD 3.08, Chromosome 14, 85 cM, LOD 2.42 |
Howard University Family Study4 |
AA (n=1017) U.S. 2nd cohort of 980 West Africans |
GWAS Affymetrix 6.0 |
Systolic BP | rs5743185, rs16877320, rs11160059, rs17365948, rs12279202, rs3751664 |
FBPP5 | AA (n=737) (cases) European Americans (n=573)(controls) |
microsatellite markers and a set of informative SNPs: Admixture mapping |
hypertension | 5 markers on chromosome 6q (near region 6q24); 2 markers on chromosome 21 (near region 21q21) may contain genes influencing risk of hypertension in AA |
Dallas Heart Study6 | AA (n=1743), White (n=1000), Mexican American (n=581) |
Admixture mapping 2,270 ancestral informative markers |
Hypertension | rs2272996 |
CARe7 | AA (n=8591), replication Cohorts: Women’s Health Initiative; Maywood, GENOA, Howard University Family Study, native Nigerian African Sample (n=11,882) |
GWAS Affymetrix 6.0 50K Cardiovascular gene-centric array |
Systolic and diastolic blood pressure |
none of the top SNPs replicated |
CARe8 | AA (n=6303), replication Cohorts: Women’s Health Initiative, Maywood, GENOA, Howard University Family Study, native Nigerian African Sample (n=11,882) |
admixture mapping follow up association |
Systolic and Diastolic blood pressure |
rs7726475 between genes SUB1 and NPR3 |
International Consortium for Blood Pressure Association Studies9 |
AA (n=19,775), Europeans (n=200,000), East Asians (n=29,719), South Asians |
GWAS Meta-analysis | Systolic and Diastolic blood pressure, Hypertension |
rs13082711 (SLC4A7) (SBP/DBP); rs419076 (MECOM), (SBP); rs13107325 (SLC39A8) (SBP/DBP); rs13139571 (GUCY1A3-GUCY1B3) (SBP/DBP); rs1173771 (NPR3-C5orf23) (SBP); rs11953630 (EBF1) (SBP/DBP); rs805303 (BAT2-BAT5) (DBP); rs7129220 (ADM) (SBP/DBP); rs633185 (FLJ32810/TMEM133) (SBP); rs2521501 (FURIN- FES) (SBP/DBP); rs17608766 (GOSR2) (SBP/DBP); rs1327235 (JAG1) (SBP/DBP); rs6015450 (GNAS-EDN3) (SBP/DBP); rs17367504 (MTHFR-NPPB) (SBP/DBP); rs3774372 (ULK4) (SBP/DBP); rs1458038 (FGF5) (SBP/DBP); rs1813353 (CACNB2(3’) (SBP/DBP); rs11191548 (CYP17A1-NT5C2) (SBP/DBP); rs381815 (PLEKHA7) (SBP/DBP); rs3184504 (SH2B3) (SBP/DBP); rs1378942 (CYP1A1-ULK3) (SBP): rs12940887 (ZNF652) (SBP/DBP) |
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Simino J, Shi G, Kume R, Schwander K, Province MA, Gu CC, Kardia S, Chakravarti A, Ehret G, Olshen RA, Turner ST, Ho LT, Zhu X, Jaquish C, Paltoo D, Cooper RS, Weder A, Curb JD, Boerwinkle E, Hunt SC, Rao DC. Five blood pressure loci identified by an updated genome-wide linkage scan: Meta-analysis of the family blood pressure program. Am J Hypertens. 2011;24:347–354
Sherva R, Miller MB, Lynch AI, Devereux RB, Rao DC, Oberman A, Hopkins PN, Kitzman DW, Atwood LD, Arnett DK. A whole genome scan for pulse pressure/stroke volume ratio in african americans: The hypergen study. Am J Hypertens. 2007;20:398–402
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Zhu X, Cooper RS. Admixture mapping provides evidence of association of the vnn1 gene with hypertension. PLoS One. 2007;2:e1244
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