Table 1. Primers used for PCR amplification of in TcOPT3 cDNAs, 5′ and 3′ RACE, qRealTime-PCR, and plasmid constructions in order of their first mention in “Materials and Methods”.
Purpose | Name | Sequence (5′-3′) |
RACE PCR | TcOPT3-GSP-F | CAGTAACAGACAGGGACGATG |
TcOPT3-GSP-R | CAGCAGGTTGGCTCAGGGTA | |
TcOPT3-5′R-1-R | ACCTGCTGAGCCGTGATGCTATTA | |
TcOPT3-3′R-1-F | ACATCATCGTCCCTGTCTGTTACTG | |
TcOPT3-5′R-2-R | CGACGATTGAGTGCGAAAAGAG | |
TcOPT3-3′R-2-F | CTTCAAATCTCGCTCAAGTTTCTCT | |
Quantified-RealTime PCR | qRT-TcOPT3-F | CCGAGCAGCACGAGCGTTGT |
qRT-TcOPT3-R | GCGGTTGCGTGCGGTATGTG | |
TcUBQ-F | GGAGCCCCGCTTGGAC | |
TcUBQ-R | CGGCGAGGCGAGTGTA | |
in situ hybridization | TcOPT3-Probe-S | CCGGAATTCGGTTATCTCCTACGGCTTTG |
TcOPT3-Probe-A | CCCAAGCTTTAGGGCAAGCAGTGGTATCAA | |
Plasmid of GFP fusion | TcOPT3-EGFP-F | AAAAGTACTATGGACGCAGAGAAGGCTAACAAT |
TcOPT3-EGFP-R | TCCCCCGGGGAAAACAGGACAGCCTTTAACTCT | |
Plasmid of yeast transformation | TcOPT3-pFL61-F | ATAAGAATGCGGCCGCATGGACGCAGAGAAGGCTAA |
TcOPT3-pFL61-R | ATAAGAATGCGGCCGCAATCTTAGAAAACAGGACAGC |
F, Forword; R, Reverse. S, Sense; A, Anti-sense.