Table 3.
Comparison of the four programs on G proteins family in P-loop folds.
| BsFinder | SiteEngine | SuMo | pdbFun | |||||
|---|---|---|---|---|---|---|---|---|
| number† | ratio(%)‡ | number† | ratio(%)‡ | number† | ratio(%)‡ | number† | ratio(%)‡ | |
| 1A2B | 7601/3647 | 48/95 | 6579/1717 | 26/40 | 6375/1209 | 19/29 | 1787/381 | 21/9 |
| 1CXZ | 7832/3602 | 46/93 | 7425/1480 | 20/35 | 8388/1433 | 18/34 | 2696/403 | 15/10 |
| 1DPF | 7537/3241 | 43/92 | 5975/1343 | 23/34 | 4702/1029 | 22/26 | 1993/365 | 18/10 |
| 1FTN | 7435/3121 | 42/91 | 7147/1471 | 21/35 | 8599/1328 | 16/31 | 2232/414 | 19/11 |
| 1S1C | 7995/3827 | 47/99 | 7460/1382 | 19/36 | 6037/1299 | 22/34 | 1898/532 | 28/14 |
†The first number is the number of output sites reported by the program, the second number is the number of confirmed sites reported by the program;
‡The first number is the precision value (%) for the program, the second number is the recall value (%) for the program;