Table 4.
Comparison of the four programs on PYP-like family in Profilin-like folds.
| BsFinder | SiteEngine | SuMo | pdbFun | |||||
|---|---|---|---|---|---|---|---|---|
| number† | ratio(%)‡ | number† | ratio(%)‡ | number† | ratio(%)‡ | number† | ratio(%)‡ | |
| 1D7E | 4845/834 | 17/58 | 5017/698 | 14/48 | 2582/173 | 7/13 | 223/33 | 15/3 |
| 1F9I | 5771/1068 | 18/64 | 5680/740 | 13/44 | 3405/224 | 7/14 | 203/13 | 7/1 |
| 1KOU | 5352/1297 | 24/59 | 4521/896 | 20/41 | 2421/264 | 11/13 | 916/80 | 9/4 |
| 1NWZ | 5027/1279 | 25/63 | 5497/914 | 17/45 | 2096/243 | 12/13 | 206/23 | 12/2 |
| 2PHY | 5451/1189 | 21/57 | 4014/821 | 20/39 | 3178/285 | 9/14 | 208/15 | 8/1 |
†The first number is the number of output sites reported by the program, the second number is the number of confirmed sites reported by the program;
‡The first number is the precision value (%) for the program, the second number is the recall value (%) for the program;