Table 1. Melting curve analysis of VTEC target plasmids and pure cultures of reference strains using the SYBR®Green Real-time simplex or multiplex reactions on an AB 7500, Biorad iQ5 and Roche LightCycler 480 PCR thermal cycler (STP: standard plasmid).
AB7500 | Roche LC480 | Biorad iQ5 | |||||||
DNA | stx or eae | stx/eae | stx/eae/aggR | stx or eae | stx/eae | stx/eae/aggR | stx or eae | stx/eae | stx/eae/aggR |
STP ( stx 1) | 77.3±0 | N/A | N/A | 80.65±0.057 | N/A | N/A | 81.67±0.289 | N/A | N/A |
STP (stx2) | 78.72±0.606 | N/A | N/A | 83.14±0.063 | N/A | N/A | 83.50±0.001 | N/A | N/A |
STP (eae) | 75.70±0.001 | N/A | N/A | 80.11±0.02 | N/A | N/A | 79.50±0.001 | N/A | N/A |
Genomic DNA | 77.15±0.446or75.63±0.265 | 76.08±0.809 | 78.53±0.953 | 82.28±0.760or79.30±0.078 | 82.22±0.05078.24±0.010 | 81.23±0.05979.59±0.03582.88±0.355 | 81.33±0.258 or 80.00±0.001 | 81.70±0.274 or 79.5±0.289 | 81.58±0.20479.83±0.25883.00±0.001 |