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. Author manuscript; available in PMC: 2012 Dec 21.
Published in final edited form as: Nature. 2012 Jun 10;486(7403):361–367. doi: 10.1038/nature11159

Table 1.

New drug-off-target predictions confirmed by in vitro experiment. Representative, confirmed predictions are shown.

Drug Closest ChEMBL Molecule Tca Target SEA E-value IC50 [μM] Closest known targetb BLAST E- valuec
graphic file with name nihms373071t1.jpg
Alosetron
graphic file with name nihms373071t2.jpg 0.25 HTR2B 1.6×10−17 0.02 KCNH7 3.6e+2
graphic file with name nihms373071t3.jpg
Aprindine
graphic file with name nihms373071t4.jpg 0.38 HRH1 5.0×10−26 0.78 SCN5A 3.3e−1
graphic file with name nihms373071t5.jpg
Chlorotrianisene
graphic file with name nihms373071t6.jpg 0.31 PTGS1 1.9×10−17 0.16 ESR1 9.0e+2
graphic file with name nihms373071t7.jpg
Clemastine
graphic file with name nihms373071t8.jpg 0.31 SLC6A4 1.1×10−14 0.42 KCNH2 6.1e+1
graphic file with name nihms373071t9.jpg
Dyclonine
graphic file with name nihms373071t10.jpg 0.36 DRD4 1.5×10−17 4.1 SLC6A3 2.3e+2
graphic file with name nihms373071t11.jpg
Fasudil
graphic file with name nihms373071t12.jpg 0.37 ADRA2A 1.1×10−7 4.0 CCR2 1.5e−9
graphic file with name nihms373071t13.jpg
Prenylamine
graphic file with name nihms373071t14.jpg 0.31 OPRM1 1.1×10−8 1.8 CACNA1G 3.5e+0
graphic file with name nihms373071t15.jpg 0.30 HRH1 3.2×10−66 7.9 SCN5A 3.3e−1
graphic file with name nihms373071t16.jpg
Sertraline
graphic file with name nihms373071t17.jpg 0.33 HRH2 5.1×10−45 1.4 HTR4 6.8e−51
graphic file with name nihms373071t18.jpg
Terfenadine
graphic file with name nihms373071t19.jpg 0.24 SCN5A 8.9×10−8 7.1 CYP2D6 5.9e+1
a

Tc: The Tanimoto coefficient using ECFP_4-based molecular similarity to the closest ChEMBL reference molecule in the target set.

b

Closest known target: a known target of the drug that has highest sequence similarity to the predicted target.

c

BLAST E-value: based on the sequence identity of the predicted target to the closest known target; values greater than 10−5 represent unrelated proteins.