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. Author manuscript; available in PMC: 2013 May 1.
Published in final edited form as: J Comput Aided Mol Des. 2012 Jan 25;26(5):517–525. doi: 10.1007/s10822-012-9544-3

Table 3.

Error statistics for interaction energies of host-guest complexes

Linear Fita
RMSD (Å)c
MUE
(kcal/mol)
RMSE
(kcal/mol)
m R2 host1 host2/3
Quantum optimized structures
   OPLS-2005 59.1 70.9 0.96 0.90 -- --
   AMBER* 35.2 53.0 0.91 0.90 -- --
   MMFFs 25.2 33.5 0.94 0.94 -- --
   MM3*b 17.2 21.7 1.07 0.99 -- --
   CHARMm/VC 9.9 17.3 0.96 0.99 -- --
Force-field optimized structures
   OPLS-2005 32.0 43.3 1.26 0.97 2.0 0.4
   AMBER* 16.8 18.4 0.97 0.98 2.7 1.2
   MMFFs 17.2 19.3 1.02 0.98 3.3 0.5
   MM3*b 20.2 28.2 1.11 0.98 2.8 --
   CHARMm/VC 24.0 27.4 0.96 0.97 2.0 0.5
a

m and R2 are slope and correlation coefficient respectively, obtained from linear regression fitting.

b

MM3* calculations do not include imidazolium containing complexes.

c

Root-mean-squared deviation (RMSD) was computed with respect to the quantum optimized structures.