Table 2.
Quantitative trait loci mapped in 100 BC1S1 and 100 BC2S1 families for vigour traits under non-stress, drought, salt and nutrient deficiency conditions
| Additive effect for the crop allele (% explained variance) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Trait | Pop. | QTLname | Most significant marker | LG | QTLxE | C-D1 | D | C-SN | N | S |
| Plant height (cm) | BC1 | L-7-1 | QGF25M24-1 | 7 | yes | -2.06(6) | 0.39(3) | |||
| L-9-1 | CLS_S3_Contig2201-5-OP5 | 9 | yes | -4.61(32) | -0.79(13) | -2.32(30) | ||||
| L-1-1 | QGC26E22.yg-2-OP4 | 1 | yes | 0.74(12) | ||||||
| L-3-3 | QGF21B10.yg.ab1_PAP2_LE1382_12 | 3 | yes | -0.48(6) | 0.39(3) | |||||
| L-5-2 | CLS_S3_Contig1313-2-OP5 | 5 | yes | -1.19(11) | -1.72(4) | -0.49(5) | -1.53(13) | |||
| BC2 | L-7-1 | QGB11B18.yg-2-OP5 | 7 | yes | -1.30(4) | -0.73(3) | ||||
| L-9-1 | CLS_S3_Contig2201-5-OP5 | 9 | yes | -0.53(3) | ||||||
| L-4-4 | Contig1094-1 | 4 | no | 0.42(1) | 0.42(6) | 0.42(1) | 0.42(9) | 0.42(2) | ||
| L-8-2 | CLX_S3_Contig8250_1298 | 8 | yes | 1.46(8) | 0.72(14) | 1.87(19) | 0.38(6) | 1.57(24 | ||
| Fresh weight (g) | BC1 | FW-7-2 | CLSS4482.b2_C18-6-OP5 | 7 | yes | 4.02(10) | 0.20(4) | 0.96(4) | 0.34(27) | 1.28(22) |
| FW-9-2 | CLS_S3_Contig2201-5-OP5 | 9 | yes | 2.38(3) | 0.27(17) | 0.48(3) | ||||
| FW-1-2 | QGG6E14.yg.ab1_PHYB_1360 | 1 | yes | 4.32(11) | 1.50(11) | 0.14(4) | 0.92(11) | |||
| FW-4-5 | Contig6039-19 | 4 | yes | 3.04(6) | ||||||
| BC2 | FW-7-2 | CLS_S3_Contig7594-1-OP5 | 7 | no | 0.28(1) | 0.28(9) | 0.28(1) | 0.28(5) | 0.28(1) | |
| FW-1-2 | CLSS3922.b1_C21-4-OP4 | 1 | yes | 2.73(7) | 2.29(19) | 0.97(19) | ||||
| FW-8-1 | RHCLS_S3_Contig9441_1 | 8 | no | 0.32(1) | 0.32(13) | 0.32(1) | 0.32(7) | 0.32(2) | ||
| Dry weight (g) | BC1 | DW-7-3 | CLSS4482.b2_C18-6-OP5 | 7 | no | 0.08(1) | 0.08(15) | 0.08(3) | 0.08(19) | 0.08(8) |
| DW-4-6 | CLRY544-1 | 4 | yes | -0.39(16) | -0.04(4) | -0.04(4) | ||||
| DW-8-3 | QG_CA_Contig5320_RPT3_LE1380_1 | 8 | no | 0.05(1) | 0.05(6) | 0.05(1) | 0.05(7) | 0.05(3) | ||
| DW-9-6 | QGG16P08-1 | 9 | yes | -0.09(4) | 0.04(6) | |||||
| BC2 | DW-7-3 | QGF25M24-1 | 7 | no | 0.07(1) | 0.07(25) | 0.07(4) | 0.07(12) | 0.07(9) | |
| DW-4-6 | Contig7363-2 | 4 | yes | -0.21(6) | -0.06(15) | -0.11(8) | ||||
| Relative moisture content (%) | BC1 | RMC-4-3 | CLRY544-1 | 4 | yes | 0.24(9) | 0.60(6) | 0.15(4) | 1.18(17) | |
| RMC-5-1 | RHCLSM9436.b1_G08_1-OP3 | 5 | yes | 0.25(10) | ||||||
| RMC-7-4 | CLSS4482.b2_C18-6-OP5 | 7 | yes | -0.73(9) | -0.17(6) | -0.85(9) | ||||
| RMC-3-4 | QGF21B10.yg.ab1_PAP2_LE1382_12 | 3 | yes | 0.79(8) | 0.18(5) | |||||
| RMC-4-7 | CLX_S3_Contig10345_1167_4 | 4 | no | 0.22(7) | 0.22(1) | 0.22(10) | 0.22(1) | 0.22(4) | ||
| RMC-6-3 | QGB25B18-1 | 6 | yes | -1.19(17) | ||||||
| RMC-8-4 | CLS_S3_Contig9218-1-OP5 | 8 | yes | -0.81(11) | 0.46(3) | -0.17(4) | ||||
| BC2 | RMC-4-3 | Contig15389-1 | 4 | yes | 0.32(19) | 1.16(14) | 0.27(16) | 0.89(23) | 0.27(9) | |
| RMC-7-4 | QGF25M24-1 | 7 | yes | 0.19(7) | -0.56(9) | |||||
| RMC-1-3 | CLRX9010-5 | 1 | yes | -1.33(19) | -0.16(5) | -0.60(11) | -0.24(8) | |||
| RMC-5-3 | Contig2221-1 | 5 | yes | 0.72(6) | -0.21(9) | |||||
1 C-D: control treatment of the drought experiment; D: drought, C-SN: control treatment of the salt-nutrient experiment, N: nutrient deficiency, S: salt