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. 2012 Jun 28;7(6):e39475. doi: 10.1371/journal.pone.0039475

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Fan et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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PSIPRED [8] is used to predict the secondary structures of the consensus sequences of the three domains. CON stands for the consensus sequences and SS stands for the predicted secondary structures. (A). ClustalX alignment of the 19 segments. The protein IDs are those of the best BLAST hit in A. queenslandica followed by the location of the predicted domain. The hash seeds that correspond to the communities from which the cluster is built are boxed. (B) and (C). ClustalX alignments of two putative novel domains predicted by SECOM only. NV stands for sea anemone and HM stands for hydra.