Table 1. Overall performance of SECOM and DIVCLUS on the five aquatic proteomes.
Species | Sponge | Coral | Hydra | Urchin | Anemone | Average | ||||||
Method | DIV | SEC | DIV | SEC | DIV | SEC | DIV | SEC | DIV | SEC | DIV | SEC |
recallclu | 51.6 | 57.0 | 9.4 | 13.8 | 57.5 | 63.0 | 89.9 | 97.4 | 2.2 | 51.4 | 42.1 | 56.5 |
precisionclu | 68.6 | 62.1 | 89.6 | 51.3 | 70.9 | 64.1 | 80.6 | 77.9 | 95.6 | 69.1 | 81.1 | 64.9 |
F1clu | 58.9 | 59.4 | 17.0 | 21.7 | 63.5 | 63.5 | 85.0 | 86.6 | 4.3 | 59.0 | 55.4 | 60.4 |
recallinClu | 17.3 | 17.6 | 20.7 | 26.8 | 22.7 | 24.7 | 17.6 | 17.5 | 18.7 | 17.5 | 19.4 | 20.8 |
precisioninClu | 98.7 | 97.0 | 99.9 | 99.3 | 99.2 | 98.6 | 99.7 | 99.3 | 99.9 | 99.2 | 99.5 | 98.7 |
F1inClu | 29.4 | 29.8 | 34.3 | 42.2 | 36.9 | 39.5 | 29.9 | 29.8 | 31.5 | 29.8 | 32.5 | 34.4 |
Runtime (min) | 3660 | 1.4 | 1803 | 0.4 | 4024 | 0.7 | 9371 | 6.7 | 2103 | 1.1 | 4192.2 | 2.1 |
All the recall, precision and F1 score values are percentiles. DIV denotes DIVCLUS and SEC denotes SECOM.