Table 2. The C-terminal amino acids of TM0476 are like those of several confirmed porins.
C-terminal amino acids (N → C) | ||||||||||
Protein | 10 | 9 | 8 | 7 | 6 | 5 | 4 | 3 | 2 | 1 |
TM0476 (T. maritima) | Y | L | Y | L | K | A | S | V | A | F |
PhoE (S. enterica) | I | V | A | I | G | L | T | Y | Q | F |
PhoE (E. coli) | I | V | A | V | G | M | T | Y | Q | F |
OmpF (E. coli) | T | V | A | V | G | I | V | Y | Q | F |
OmpC (E. coli) | I | V | A | L | G | L | V | Y | Q | F |
Position 1 indicates the C-terminal amino acid. Hydrophobic residues are boldface. All porins shown possess the essential terminal phenylalanine and hydrophobic residues at positions 3, 5, 7 and 9.