Table 3. Comparison between the O. vulgaris CNS dataset and L. stagnalis CNS dataset using BLASTn and tBLASTx.
Most significance Blast E-value | Numbers of L. stagnalis ESTs having a blast hit in O. vulgaris | Numbers of O. vulgaris cDNAs having a blast hit in L. stagnalis ESTs | ||
Blastn | TblastX | Blastn | TblastX | |
E<1 e−20 | 231 | 1454 | 178 | 1617 |
1 e−20<E<1 e−15 | 78 | 136 | 65 | 300 |
1 e−15<E<1 e−10 | 101 | 199 | 113 | 486 |
1 e−10<E<1 e−5 | 194 | 258 | 259 | 1053 |
1 e−5<E<1 | 6009 | 4857 | 51316 | 46719 |
Total (E<1 e−5) | 2145 | 3551(3543) |
The number in each bracket shows the number of genes after removed redundant sequences.