Table 4. Comparison between the O. vulgaris CNS dataset and A. californica CNS dataset using BLASTn and tBLASTx.
Most significance Blast E-value | Numbers of A. californica ESTs having a blast hit in O. vulgaris cDNAs | Numbers of O. vulgaris cDNAs having a blast hit in A. californica ESTs | ||
Blastn | TblastX | Blastn | TblastX | |
E<1 e−20 | 365 | 4426 | 191 | 3276 |
1 e−20<E<1 e−15 | 287 | 650 | 95 | 614 |
1 e−15<E<1 e−10 | 271 | 853 | 190 | 960 |
1 e−10<E<1 e−5 | 690 | 1381 | 662 | 2840 |
1 e−5<E<1 | 36006 | 30943 | 43356 | 37751 |
Total (E<1 e−5) | 7849 | 8054(8044) |
The number in each bracket shows the number of genes after removed redundant sequences.