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. Author manuscript; available in PMC: 2013 Jul 1.
Published in final edited form as: Hepatology. 2012 Apr 24;56(1):28–38. doi: 10.1002/hep.25649

Table 2. Top canonical pathways represented by proteins differentially regulated in rapid progressor patients.

Top Canonical Pathwaysa P Value
Lower Expression in Rapid Progressors
1. Aryl Hydrocarbon Receptor Signaling 1.80E-04
2. Glutathione Metabolism 7.29E-04
3. Metabolism of Xenobiotics by Cytochrome P450 1.12E-03
4. NRF2-mediated Oxidative Stress Response 2.25E-03
5. Xenobiotic Metabolism Signaling 5.27E-03
Higher Expression in Progressors
1. CTLA4 Signaling in Cytotoxic T Lymphocytes 1.27E-03
2. Cytotoxic T Lymphocyte-mediated Apoptosis of Target Cells 1.35E-03
2. Allograft Rejection Signaling 1.35E-03
3. OX40 Signaling Pathway 1.35E-03
5. Graft-vs-Host Disease Signaling 2.43E-03
a

Canonical pathways represent well-established signaling or disease pathways in IPA. Ranking of pathways within each group was based on an FDR-adjusted P value determined by IPA. A summary report containing the proteins mapped to each canonical pathway is provided in Supplemental Table S3.