Table 3. Genome Statistics.
Attribute | Value | % of Total |
---|---|---|
Genome size (bp) | 4,127,237 | 100.00% |
DNA coding region (bp) | 3,689,184 | 89.39% |
DNA G+C content (bp) | 2,595,845 | 62.95% |
Number of scaffolds | 3 | |
Total genes | 3,672 | 100.00% |
RNA genes | 57 | 1.55% |
rRNA operons | 2 | |
tRNA genes | 47 | 1.28% |
Protein-coding genes | 3,615 | 98.45% |
Pseudo genes | 76 | 2.07% |
Genes with function prediction (proteins) | 2,728 | 74.29% |
Genes in paralog clusters | 1,916 | 52.18% |
Genes assigned to COGs | 2,788 | 75.93% |
Genes assigned Pfam domains | 2,729 | 74.32% |
Genes with signal peptides | 746 | 20.32% |
Genes with transmembrane helices | 703 | 19.14% |
CRISPR repeats | 1 |