Table 1. 26 Genes investigated.
| Rv - number | Gene | whole gene sequence | Gene (bp) | PCR (bp) |
| Rv0129c | fbpC | yes | 1023 | 1304 |
| Rv0288 | esxH | yes | 291 | 788 |
| Rv0388c | ppe9 | yes | 543 | 713 |
| Rv0407 | fgd1 | yes | 1011 | 1606 |
| Rv0410c | pknG | yes | 2253 | 2620 |
| Rv0557 | mtfB | yes | 1137 | 1340 |
| Rv1009 | rpfB | yes | 1089 | 1360 |
| Rv1617 | pykA | no | 1419 | 315 |
| Rv1811 | mgtC | yes | 705 | 880 |
| Rv1884c | rpfC | yes | 531 | 689 |
| Rv1908c | katG | no | 2223 | 1061 |
| Rv1980c | mpt64 | yes | 687 | 858 |
| Rv2032 | Acg | yes | 996 | 1359 |
| Rv2389c | rpfD | yes | 465 | 836 |
| Rv2428 | ahpC | no | 588 | 237 |
| Rv2430c | ppe41 | yes | 585 | 796 |
| Rv2431c | pe25 | yes | 300 | 649 |
| Rv2450c | rpfE | yes | 519 | 938 |
| Rv2609c | – | yes | 1056 | 1314 |
| Rv2610c | pimA | yes | 1137 | 1302 |
| Rv2611c | – | yes | 951 | 1175 |
| Rv2612c | pgsA1 | yes | 654 | 815 |
| Rv2613c | – | yes | 588 | 830 |
| Rv2628 | – | yes | 363 | 521 |
| Rv2629 | – | yes | 1125 | 1575 |
| Rv3547 | – | yes | 456 | 846 |
PCR: polymerase chain reaction.