Table 4.
Functions of genes in Flowers. For a GO category, we tested significance of frequency of Flower genes compared to total number of the human genes. This table represents GO categories showing P < 10−4, the observed number of Flower genes ≥3, and the ratio of observation to expectation ≥3.
GO: ID | Detail | Catalog | Observationa | Obs/Expb | Multigene families on Flowers |
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GO: 0004556 | Alpha-amylase activity | Function | 3 | 21.1 | Amylase alpha |
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GO: 0015020 | Glucuronosyltransferase activity | Function | 15 | 15.0 | UDP glucuronosyltransferase |
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GO: 0019864 | IgG binding | Function | 7 | 14.7 | Fc fragment of IgG |
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GO: 0016339 | Calcium-dependent cell-cell adhesion | Process | 12 | 10.5 | Protocadherin beta |
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GO: 0003823 | Antigen binding | Function | 19 | 10.0 | Immunoglobulin, leukocyte immunoglobulin-like receptor, killer cell immunoglobulin-like receptor |
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GO: 0004364 | Glutathione transferase activity | Function | 9 | 9.0 | Glutathione S-transferase |
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GO: 0019882 | Antigen processing and presentation | Process | 13 | 8.6 | Major histocompatibility complex, class I, MHC class I polypeptide-related sequence, retinoic acid early transcript, UL16-binding protein, C-type lectin domain family |
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GO: 0006805 | Xenobiotic metabolic process | Process | 10 | 8.4 | UDP glucuronosyltransferase, defensin, alpha, aldo-keto reductase family |
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GO: 0006952 | Defense response | Process | 17 | 4.9 | Interferon, alpha, leukocyte immunoglobulin-like receptor, pregnancy-specific beta-1-glycoprotein, major histocompatibility complex, class I, SP140 nuclear body protein |
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GO: 0032312 | Regulation of ARF GTPase activity | Process | 7 | 4.8 | ArfGAP with GTPase domain, centaurin, gamma-like family |
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GO: 0020037 | Heme binding | Function | 24 | 4.4 | Cytochrome P450, nitric oxide synthase, HECT domain and RLD |
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GO: 0007565 | Female pregnancy | Process | 10 | 4.3 | Pregnancy-specific beta-1-glycoprotein |
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GO: 0005792 | Microsome | Component | 33 | 3.9 | UDP glucuronosyltransferase, cytochrome P450, flavin-containing monooxygenase, hydroxy-delta-5-steroid dehydrogenase |
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GO: 0042742 | Defense response to bacterium | Process | 12 | 3.2 | Defensin, alpha, defensin, beta, MHC class I polypeptide-related sequence |
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GO: 0009615 | Response to virus | Process | 12 | 3.1 | Defensin, alpha, interferon, alpha, chemokine (C-C motif) ligand, leukocyte immunoglobulin-like receptor |
aThe observed number of Flower genes for a GO category.
bThe ratio of the observed number of Flower genes to the expected number of genes.