Table 2.

Results from single-marker tests with q-value^a estimates < 0.5.

Phenotype	dbSNP	Chr.	Position (kb)	Gene	p-value	q-valuea	q-valueb	Local FDR
SAS	rs17022444	2	82941	NA	1.18E-10	4.83E-05	5.84E-05	3.09E-04
	rs2126709	11	123101	ZNF202	3.75E-07	0.062	0.092	0.312
	rs10811771	9	22761	NA	7.92E-07	0.114	0.130	0.473
	rs876347	9	118111	NA	1.90E-06	0.219	0.194	0.668
	rs1459148	14	97910	NA	1.97E-06	0.225	0.194	0.677
	rs337161*	1	217303	NA	3.35E-06	0.317	0.275	0.775
	rs1494373*	1	217318	MOSC2	6.06E-06	0.353	0.282	0.803
	rs16996151	4	90336	KIAA0914	6.20E-06	0.441	0.307	0.859
	rs4837752	9	120136	NA	6.31E-06	0.447	0.307	0.861
	rs17119280	1	59511	FGGY	7.28E-06	0.451	0.307	0.863
	rs12625057	20	57224	ZNF831	7.48E-06	0.482	0.307	0.879
	rs7928794	11	35658	TRIM44	8.35E-06	0.489	0.307	0.882
AIMS	rs7669317	4	106815	NA	7.70E-08	0.050	0.038	0.214
	rs9302841	16	7167	A2BP1	2.02E-06	0.469	0.368	0.856
	rs6743931	2	240155	NA	2.24E-06	0.491	0.368	0.868
BARS	rs12147450	14	20027	NA	6.18E-07	0.339	0.286	0.638
	rs2251301	8	11156	NA	1.22E-06	0.460	0.286	0.753

^aq-value estimates calculated as described by Bukszar et al. (13)

^bq-value estimates, calculated as described by Storey et al. (12). NA indicates that there is no known or predicted gene in this location.

^*Linkage disequilibrium (r²) is 0.33.