Table 3. Variability within Individual Laboratory Processes.
Method and Variable | n | p value1 | % Variance |
RNA Extraction | |||
RNA Extraction Machine | 4 | 0.843 | 0.10% |
RNA Extraction Kit Lot | 26 | <2×10−16 | 18% |
RNA Operator | 6 | 0.517 | 0.40% |
cDNA Synthesis | |||
cDNA Synthesis Machine | 4 | 0.074 | 1.6% |
cDNA Kit Lot | 6 | 8.5×10−11 | 6.9% |
cDNA Operator | 5 | 0.012 | 0.8% |
Sample Addition to Assay Plate | |||
Sample Addition Machine | 5 | 0.149 | 0.8% |
Sample Addition Operator | 8 | 0.358 | 0.9% |
qRT-PCR | |||
qRT-PCR Machine | 6 | 0.032 | 1.3% |
qRT-PCR Assay Plate Lot | 24 | <2×10−16 | 21.8% |
qRT-PCR Operator | 6 | 0.016 | 1.5% |
p values in bold are <0.05.