Table 5. Comparison of genus of the whole secondary structure between RNA sequences in the PDB dataset (190 sequences in total) and in the RNA STRAND dataset (1939 sequences in total).
Total genus | No. of RNA sequences reportedin PDB dataset | Proportion | No. of RNA sequences reported inRNA STRAND dataset | Proportion |
1 | 66 | 0.347 | 597 | 0.308 |
2 | 23 | 0.121 | 263 | 0.136 |
3 | 5 | 0.026 | 414 | 0.214 |
4 | 18 | 0.095 | 585 | 0.302 |
5 | 8 | 0.042 | 22 | 0.011 |
6 | 2 | 0.011 | 0 | 0 |
7 | 3 | 0.016 | 7 | 0.004 |
8 | 2 | 0.011 | 2 | 0.001 |
9 | 2 | 0.011 | 8 | 0.004 |
10 | 5 | 0.026 | 40 | 0.021 |
11 | 4 | 0.021 | 1 | 0.001 |
12 | 9 | 0.047 | 0 | 0 |
13 | 3 | 0.016 | 0 | 0 |
14 | 34 | 0.179 | 0 | 0 |
15 | 4 | 0.021 | 0 | 0 |
16 | 0 | 0 | 0 | 0 |
17 | 1 | 0.005 | 0 | 0 |
18 | 1 | 0.005 | 0 | 0 |