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. Author manuscript; available in PMC: 2013 May 1.
Published in final edited form as: Free Radic Biol Med. 2012 Mar 1;52(9):1577–1583. doi: 10.1016/j.freeradbiomed.2012.02.025

Table 2.

The interaction of single nucleotide polymorphisms with smoking status in the Health, Aging and Body Composition Studya

Population Phenotype SNP Gene Function P-valueb SNP Type Key Findingsc
European Americans ppFEV1 rs9787810 PRDX5 Peroxidase Activity 0.0001 5’ region CS: ppFEV111% lower for TT/TC vs. CC; d
FS: ppFEV13% higher for TT/TC vs. CC;
NS: ppFEV1 3% lower for TT/TC vs. CC.
FEV1/FVC rs11631100 IDH3A Reducing Equivalents 0.0003 Intron CS: ratio higher (by 6) for AA vs. AG/GG;
FS, NS: ratio does not differ by genotype.
rs9787810 PRDX5 Peroxidase Activity 0.0003 5’ region CS: ratio lower (by 3) for TT/TC vs. CC
FS, NS: ratio does not differ by genotype.
African Americans ppFEV1 NONE
FEV1/FVC rs8030346 IDH2 Reducing Equivalents 0.0006 Intron CS: ratio lower (by 3) for TT and (by 4) for CT (both vs. CC);
FS: ratio higher (by 7) for TT and (by 4) for CT (both vs. CC);
NS: ratio does not differ by genotype
rs6107100 IDH3B Reducing Equivalents 0.000005 Intron CS: ratio higher (by 6) for AC vs. AA/CC
FS, NS: ratio does not differ by genotype
rs6037255 IDH3B Reducing Equivalents 0.001 Intron CS: ratio higher (by 5) for TT/TG vs. GG
FS: ratio higher (by 2) for TT/TG vs. GG
NS: ratio does not differ by genotype
rs7549530 MGST3 Glutathione S-Transferase 0.001 5’ region CS: ratio lower (by 5) for CG vs. CC/GG
FS: ratio lower (by 2) for CG vs. CC/GG
NS: ratio does not differ by genotype
rs2042286 SEPW1 Selenoprotein 0.0006 3’ region CS: ratio higher (by 5) for TT/TC vs. CC
FS, NS: ratio does not differ by genotype
a

All results with FDR-adjusted p-value <0.05

b

Nominal p-values shown

c

Abbreviations: CS (current cigarette smokers); FS (former cigarette smokers).

d

Current smokers who were either homozygous (TT) or heterozygous (TC) for the minor allele had an 11% lower percent predicted FEV1 than current smokers that were homozygous for the major allele (CC).