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. 2012 Jul 9;7(7):e40155. doi: 10.1371/journal.pone.0040155

Table 5. Combined performance statistics of SVM classifiers employing solo features and hybrid approaches in predicting O-glycosites (using balanced dataset).

Feature Sensitivity (%) Specificity (%) Accuracy (%) MCC (%) AUC (%)
CPP 68.10 72.41 70.26 0.41 0.74071
CPP+SS 70.69 71.55 71.12 0.42 0.75743
CPP+ASA 67.24 75.00 71.12 0.42 0.75780
CPP+SS+ASA 72.41 75.00 73.71 0.47 0.76955
BPP 66.38 67.24 66.81 0.34 0.73023
BPP+SS 69.83 68.10 68.97 0.38 0.74160
BPP+ASA 77.59 61.21 69.40 0.39 0.71143
BPP+SS+ASA 65.52 72.41 68.97 0.38 0.73766
PPP 75.00 71.55 73.28 0.47 0.81250
PPP+SS 73.28 73.28 73.28 0.47 0.76806
PPP+ASA 74.14 71.55 72.84 0.46 0.77341
PPP+SS+ASA 77.59 69.83 73.71 0.48 0.76925

Footnotes: BPP- Binary profile of patterns, CPP- Composition profile of patterns, PPP- PSSM profile of patterns, MCC- Matthews correlation coefficient, AUC- Area under curve, SS-secondary structure and ASA- Accessible surface area.