Table 1.
Differentially expressed genes in soybean (PI 595999) resistant roots uninfected and infected with M. javanica.
| Cluster | 1PIN (115 reads) | 2PII (246 reads) | Statistical tests (p-values) Stekel | Audic-Claverie | Fisher | Blast best hit |
|---|---|---|---|---|---|---|
| Contig7 | 4 | 2 | 1.52 | 0.037 | 0.089 | Hypothetical protein |
| Contig3 | 1 | 11 | 1.92 | 0.048 | 0.114 | Metallothionein-like protein |
| Contig6 | 0 | 6 | 0.068 | 0.182 | SLAH4 (SLAC1 Homologue 4) | |
| Contig8 | 0 | 5 | 0.1 | 0.33 | SLAH1 (SLAC1 Homologue 1) | |
| Contig9 | 0 | 5 | 0.1 | 0.33 | Zinc finger, AN1-type; A20-type | |
| Contig1 | 1 | 7 | 0.81 | 0.164 | 0.44 | Auxin-repressed protein |
| Contig4 | 4 | 6 | 0.14 | 0.252 | 0.732 | Thioredoxin |
| Contig10 | 2 | 3 | 0.07 | 0.29 | 0.656 | ACL098Cp |
| Contig16 | 1 | 5 | 0.35 | 0.291 | 0.669 | Auxin-repressed protein |
| Contig2 | 3 | 10 | 0.24 | 0.3 | 0.762 | Nuclear transport factor2 (NTF-2) |
| Contig5 | 3 | 5 | 0.05 | 0.313 | 0.714 | 60S ribosomal protein |
| 11 | 19 | 65 | - | - | - | - |
1
PIN = PI 595099 uninoculated;
2
PII = PI 595099 inoculated with M. javanica.