Table 3.
Expressed genes in uninoculated soybean (PI 595099) roots.
| Contig | Name | Organism | Accession code | E-value | Number of ESTs PIN1 | Number of ESTs PII2 | Total number of ESTs |
|---|---|---|---|---|---|---|---|
| Contig7 | Hypothetical protein Positives = 66/70 (94%) | Vitis vinífera | emb|CAN65763.1 | 3e-31 | 4 | 2 | 6 |
| Contig12 | ADP-ribosylation factor Positives = 181/181 (100%) | Hyacinthus orientalis | gb|AAT08648.1| | 2e-99 | 3 | 1 | 4 |
| Contig15 | Polyprotein Positives = 29/58 (50%) | Potato virus Y | gb|ABC70481.1 | 0.6 | 3 | 0 | 3 |
| Contig22 | No hit blast | - | - | - | 3 | 0 | 3 |
| Contig23 | Methionine-R-sulfoxidereductase B1 protein Positives = 130/148 (87%) | Capsicum annuum | gb|ABO64854.1| | 1e-72 | 3 | 0 | 3 |
| Contig24 | Ser/Thr protein kinase Positives = 31/31 (100%). | Lotus japonicus | dbj|BAD95894.1| | 7e-10 | 2 | 1 | 3 |
| Contig26 | Wound-induced basic protein, Positives = 46/47 (97%), | Vitis vinífera | emb|CAO15234.1| | 5e-17 | 2 | 1 | 3 |
| Contig27 | No hit blast | - | - | - | 3 | 0 | 3 |
| Contig28 | Auxin-repressed 12.5 kDa protein, Positives = 52/55 (94%) | Robinia pseudoacacia | gb|AAG33924.1| | 1e-23 | 3 | 0 | 3 |
| Contig29 | 60S ribosomal protein L27a-2 Positives = 124/134 (92%). | Arabidopsis thaliana | sp|Q9LR33.1|R27A2_ARATH | 5e-54 | 3 | 0 | 3 |
| Contig30 | No hit blast | - | - | - | 3 | 0 | 3 |
| Contig31 | Putative Kunitz trypsin protease inhibitor Positives = 109/109 (100%.) | Glycine max | gb|ACA23205.1| | 2e-59 | 3 | 0 | 3 |
| Contig32 | Metallothionein-like protein 1 Positives = 45/57 (78%) | Trifolium repens | sp|P43399.1|MT1_TRIRP | 8e-13 | 3 | 0 | 3 |
| Contig40 | Cysteine proteinase inhibitor (Cystatin) Positives = 88/94 (93%), | Vigna unguiculata | sp|Q06445.1|CYTI_VIGUN | 5e-41 | 2 | 0 | 2 |
| Contig45 | Grx_I1 - glutaredoxin subgroup III, Positives = 94/170 (55%) | Zea mays | gb|ACG27551.1| | 2e-27 | 2 | 0 | 2 |
| Contig47 | Ethylene-responsive family protein, Positives = 97/121 (80%) | Arabidopsis thaliana | ref|NP_194639.1| | 7e-42 | 2 | 0 | 2 |
| Contig49 | Histidine-containing phosphotransfer protein 1 Positives = 130/154 (84%) | Arabidopsis thaliana | sp|Q9ZNV9.1|AHP1_ARATH | 7e-46 | 2 | 0 | 2 |
| Contig55 | Putative mitochondrial ABC transporter ATM1b Positives = 39/79 (49%) | Antonospora locustae | gb|AAY27418.1| | 5.1 | 2 | 0 | 2 |
| Contig56 | Hypothetical protein Positives = 73/77 (94%) | Vitis vinifera | emb|CAN70604.1| | 5e-32 | 2 | 0 | 2 |
| Contig59 | Ribosomal protein L19 Positives = 78/82 (95%) | Hyacinthus orientalis | gb|AAT08672.1| | 5e-26 | 2 | 0 | 2 |
| Contig67 | Small nuclear ribonucleoprotein, putative Positives = 52/53 (98%) | Arabidopsis thaliana | gb|AAM63846.1| | 1e-22 | 2 | 0 | 2 |
| Contig75 | Hypothetical protein OsI_20016 Positives = 32/63 (50%) | Oryza sativa | gb|EEC79253.1| | 9.0 | 2 | 0 | 2 |
| Contig76 | Putative lysine decarboxylase, Positives = 31/32 (96%) | Musa balbisiana | dbj|BAG70979.1| | 5e-08 | 2 | 0 | 2 |
| Contig78 | Far-red impaired responsive family protein / FAR1 family protein, Positives = 178/235 (75%) | Arabidopsis thaliana | ref|NP_567085.1| | 2e-65 | 2 | 0 | 2 |
| 24 | 61 | 6 | 67 |
1
PIN = PI 595099 uninoculated;
2
PII = PI 595099 inoculated with M. javanica.