Skip to main content
. 2012 Jul 9;198(1):57–67. doi: 10.1083/jcb.201112114

Table 1.

M.I and C.I. resulting from knockdown of every potential Rab-GAP protein during BC migration

Drosophila identifier Common name dsRNA (VDRC no.) M.I. C.I. n Human orthologue
CG1093 Pollux 27335 N/A N/A N/A TBC1D1 and TBC1D4
106969 0.98 0.95 20
CG1695 CG1695 20340 0.88 0.69 29 SGSM1-2
48062 0.98 0.95 22
106947 0.875 0.74 34
CG4041 CG4041 34780 0.83 0.67 3 TBCK
108887 0.98 0.95 55
CG4552 CG4552 40538 0.51 0.30 41 TBC1D23
110700 0.98 0.96 47
CG5337 CG5337 22070 0.99 0.94 17 TBC1D16
22069 0.96 0.90 20
110067 1.00 1.00 20
CG5344 Whacked 22081 0.96 0.92 24 TBC1D10A-B-C
22082 0.88 0.75 44
CG5745 CG5745 35034 0.97 0.93 45 TBC1D22A-B
35036 0.94 0.84 32
108659 1.00 1.00 21
CG5916 CG5916 110561 0.95 0.90 20 TBC1D6
CG5978 CG5978 21000 0.98 0.94 72 TBC1D13
21001 0.97 0.92 38
110396 0.97 0.93 28
CG6182 CG6182 14705 0.88 0.78 32 TBC1D7
14706 0.97 0.93 15
106667 0.98 0.94 34
CG7061a CG7061 27823 0.97 0.94 17 RAB3GAP2
27824 0.88 0.79 39
106905 0.54 0.41 39
CG7112 GapcenAb 35174 0.92 0.82 91 RAB-GAP1(GAPCENA) and TBC1D18
103588 0.97 0.93 61
CG7324 CG7324 32929d 0.96 0.89 232 TBC1D8B-9B
CG7742 CG7742 25535 1.00 1.00 16 TBC1D19
25536 0.99 0.97 32
100125 0.99 0.96 28
CG8085 RN-tre 28192ce 0.56 0.36 96 RNTRE (USP6NL), TBC1D28, USP6, TBC1D3F-G-H
28194c 0.65 0.42 73
108670 0.87 0.75 60
CG8155 CG8155 24218 0.85 0.75 28 TBC1D25
24221 0.58 0.42 31
108444 0.99 0.95 22
CG8449 CG8449 24102 1.00 1.00 17 TBC1D5
CG9339 CG9339 44655 0.99 0.98 42 TBC1D24
108736 0.99 0.96 23
CG11490 Tbc1d15-17b 20040 0.95 0.90 66 TBC1D15-17
1096668 0.94 0.84 51
CG11727 Evi5b 17548 0.76 0.61 85 EVI5 and EVI5L
17549e 0.32 0.14 161
105146 0.88 0.73 49
CG12241 CG12241 33729d 0.95 0.90 201 SGSM3
CG16896 CG16896 20315 0.82 0.76 17 WDR67
20316 0.97 0.88 18
107134 0.91 0.81 43
CG17883 CG17883 30277 0.94 0.83 30 TBC1D20
CG32506 CG32506 28776d 0.96 0.89 232 SGSM1-2
CG32580 CG32580 105591 0.99 0.96 24 MUC16
CG33715 Msp-300 25906 0.97 0.92 83 SYNE1-2 and CLMN
40143 1.00 1.00 12
40145 0.98 0.95 42
50192 0.71 0.58 19
107183 0.99 0.98 56
109023 0.97 0.93 29
CG42795 CG42795 17314 0.95 0.90 73 TBC1D30
108779 0.98 0.93 29

N/A, not applicable: this dsRNA line affects drastically the morphology of the egg chamber. VDRC, Vienna Drosophila RNAi Center.

a

This Rab-GAP protein does not have a TBC domain.

b

These common names have been introduced in this study.

c

Crosses were performed at 25°C to minimize morphological phenotypes.

d

Lines obtained from TRiP at Harvard Medical School.

e

This RNAi fly line is used subsequently is this study.