Table 1.
H5N1 influenza viruses possessing the corresponding HACSa
Clade | No. of isolates | No. (%) of isolates with HACS |
|||||
---|---|---|---|---|---|---|---|
GBBBBR↓Gb | IBBBBR↓Gb | RBBBBR↓Gb | -BBBBR↓Gb | SBBBBR↓Gb | Other | ||
0 | 93 | 2 (2.2)c | 0 | 89 (95.7) | 2 (2.2) | 0 | 0 |
1 | 312 | 19 (6.1) | 0 | 262 (84.0) | 29 (9.3) | 0 | 2 (0.6) |
2.1.1 | 25 | 0 | 0 | 23 (92.0) | 1 (4.0) | 0 | 1 (4.0) |
2.1.2 | 34 | 0 | 0 | 34 (100) | 0 | 0 | 0 |
2.1.3 | 106 | 0 | 0 | 22 (20.8) | 0 | 84 (79.2) | 0 |
2.2 | 384 | 6 (1.6) | 0 | 376 (97.1) | 2 (0.5) | 0 | 0 |
2.3.1 | 13 | 0 | 0 | 0 | 13 (100) | 0 | 0 |
2.3.2 | 62 | 0 | 0 | 1 (1.6) | 61 (98.4) | 0 | 0 |
2.3.3 | 5 | 0 | 0 | 0 | 5 (100) | 0 | 0 |
2.3.4 | 115 | 0 | 0 | 0 | 115 (100) | 0 | 0 |
2.4 | 25 | 0 | 0 | 23 (92.0) | 2 (8.0) | 0 | 0 |
2.5 | 14 | 0 | 0 | 4 (28.6) | 10 (71.4) | 0 | 0 |
3 | 30 | 0 | 1 (3.3) | 29 (96.7) | 0 | 0 | 0 |
4 | 14 | 0 | 0 | 14 (100) | 0 | 0 | 0 |
5 | 23 | 0 | 22 (95.7) | 0 | 0 | 0 | 1 (4.3) |
6 | 4 | 0 | 0 | 4 (100) | 0 | 0 | 0 |
7 | 14 | 11 (78.6) | 0 | 1 (7.1) | 0 | 0 | 2 (14.3) |
8 | 4 | 0 | 0 | 4 (100) | 0 | 0 | 0 |
9 | 26 | 0 | 0 | 26 (100) | 0 | 0 | 0 |
Total | 1,303 | 38 (2.9) | 23 (1.8) | 912 (70.0) | 240 (18.4) | 84 (6.4) | 6 (0.5) |
Sequence data were obtained from the Influenza Information Resources of the WHO (http://www.who.int/influenza/resources).
B, basic residue R/K. The sequences of more than 80% of the strains in the P5 to P2 positions were R-R-K-K-.
Number of isolates possessing a specific amino acid at position P6 (proportion of isolates with a specific amino acid at position P6 in the H5N1 virus of the corresponding H5N1 clade in the Influenza Information Resources of the WHO database).