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. 2012 Jun 11;40(Web Server issue):W340–W347. doi: 10.1093/nar/gks561

Figure 3.

Figure 3.

Example of SeqFIRE and GBlocks detection of conserved alignment regions under high stringency criteria. A fragment of BAliBASE reference 1 V2 alignment number BB12001 is shown between positions 129 and 187. The gray bars below the alignment indicate the conserved blocks detected by SeqFIRE and the black bars show the conserved blocks detected by GBlocks. The dark background within the alignment indicates conserved amino acids.