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. 2012 Jun 27;7:3211–3219. doi: 10.2147/IJN.S31373

Table 3.

Predicted parameters for MMFF94+ conformational set

Compound H-bonds (n) SH/H Sburied Stotal SMHP(MMFF94+)
DA 5 71.58 156.45 164.68 0.52
L-DOPA 4 85.63 174.55 188.54 0.47
1 3 74.75 203.03 381.96 0.33
2 4 25.25 233.29 378.34 0.54
3 6 98.04 232.34 389.49 0.34
4 3 28.99 208.67 374.68 0.47
5 1 24.43 105.31 411.50 0.20
6 1 17.78 118.10 422.57 0.24
7 3 70.13 102.85 410.57 0.08
8 2 22.72 209.30 416.51 0.45
9 3 74.11 218.03 379.11 0.38
10 2 11.20 215.25 368.15 0.55
11 4 14.94 220.00 375.44 0.55
12 4 16.46 215.50 368.48 0.54

Notes: SMHP = (Sburied − SH/H)/(Stotal), where SH/H is the hydrophilic match surface, Sburied is the contact (hydrophobic) surface, and Stotal is the total ligand surface.

Abbreviations: DA, dopamine; L-DOPA, levodopa; MMFF94, Merck Molecular Force Field (Merck & Co, Whitehouse Station, NJ); MMFF94+, after MMFF94 optimization; n, number.