Table 3.
Compound | H-bonds (n) | SH/H | Sburied | Stotal | SMHP(MMFF94+) |
---|---|---|---|---|---|
DA | 5 | 71.58 | 156.45 | 164.68 | 0.52 |
L-DOPA | 4 | 85.63 | 174.55 | 188.54 | 0.47 |
1 | 3 | 74.75 | 203.03 | 381.96 | 0.33 |
2 | 4 | 25.25 | 233.29 | 378.34 | 0.54 |
3 | 6 | 98.04 | 232.34 | 389.49 | 0.34 |
4 | 3 | 28.99 | 208.67 | 374.68 | 0.47 |
5 | 1 | 24.43 | 105.31 | 411.50 | 0.20 |
6 | 1 | 17.78 | 118.10 | 422.57 | 0.24 |
7 | 3 | 70.13 | 102.85 | 410.57 | 0.08 |
8 | 2 | 22.72 | 209.30 | 416.51 | 0.45 |
9 | 3 | 74.11 | 218.03 | 379.11 | 0.38 |
10 | 2 | 11.20 | 215.25 | 368.15 | 0.55 |
11 | 4 | 14.94 | 220.00 | 375.44 | 0.55 |
12 | 4 | 16.46 | 215.50 | 368.48 | 0.54 |
Notes: SMHP = (Sburied − SH/H)/(Stotal), where SH/H is the hydrophilic match surface, Sburied is the contact (hydrophobic) surface, and Stotal is the total ligand surface.
Abbreviations: DA, dopamine; L-DOPA, levodopa; MMFF94, Merck Molecular Force Field (Merck & Co, Whitehouse Station, NJ); MMFF94+, after MMFF94 optimization; n, number.