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. 2012 Jul 11;7(7):e39808. doi: 10.1371/journal.pone.0039808

Table 1. The data structure that was used to capture the interactome data.

Field Description
GeneID The unique identifier for a given gene (Rv ID and NCBI Gene ID)
Gene Name Assigned name of the gene
Pathway Biological role of the gene
Gene function The biological function of the gene
Interacting Partners All the interacting partners for a given gene
Type of Interaction Type of interaction (protein-protein [p-p], protein-nucleotide [p-n])
Nature of Interaction This field contains nature of interaction, such as structural complex, regulatory, signaling etc.
Method of Inferring Interaction Contains information about the experimental or computational methods used for the inference of interacting partners
Type of Evidence Type of evidence, adopted from Gene Ontology (IDA, IPI, ISO, TAS, etc)
PUBMED/Link of source PubMed ID or any web based link from where the interaction and other annotation details were inferred
Email of author E-mail address of curator

There were 11 annotation fields for reporting annotations. The data is available in PSI MITAB format.